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pre3_saliva_scaffold_18_prodigal-single.1__X__X__00212
Bact-Virpre3_saliva_scaffold_18_prodigal-single.1__X__X__00212
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-201
Domain cluster:
rep: pre1_saliva_scaffold_4_prodigal-single.1__X__X__00177__D61-102_106-112_123-254
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.74 | 57.0 | 5.77e-01 | 100.0% | 81.5% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.72 | 56.0 | 5.88e-01 | 100.0% | 89.3% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.71 | 55.0 | 5.64e-01 | 100.0% | 83.1% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.68 | 52.0 | 5.48e-01 | 100.0% | 89.1% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.66 | 17.0 | 2.84e-01 | 100.0% | 59.4% |
| 3vynA01 | 2.60.40.3780 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 25.0 | 3.28e-01 | 81.3% | 69.0% |
| 3bc9A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 25.0 | 3.24e-01 | 82.5% | 68.8% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.56 | 43.0 | 4.51e-01 | 97.6% | 85.3% |
| 2hd9A00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.55 | 34.0 | 3.66e-01 | 96.4% | 69.7% |
| 3turB01 | 2.60.40.3710 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 28.0 | 3.18e-01 | 92.8% | 62.2% |
| 2lfpA01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.54 | 38.0 | 4.18e-01 | 95.8% | 89.0% |
| 2yq2A02 | 2.60.40.3000 | Mainly Beta › Sandwich › Immunoglobulin-like › Pestivirus envelope glycoprotein E2, domain B | 0.52 | 21.0 | 2.81e-01 | 80.1% | 68.4% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 26.0 | 3.00e-01 | 83.7% | 63.7% |
| 6se8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 27.0 | 3.20e-01 | 81.3% | 73.1% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3581358 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.85 | 69.0 | 7.18e-01 | 100.0% | 89.7% |
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.84 | 70.0 | 7.11e-01 | 98.8% | 87.7% |
| 4995819 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 71.0 | 7.44e-01 | 100.0% | 98.7% |
| 4995820 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 63.0 | 7.04e-01 | 100.0% | 99.2% |
| 4140243 | 1.1.5.82 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 | 0.82 | 52.0 | 6.25e-01 | 100.0% | 93.0% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.80 | 59.0 | 6.37e-01 | 100.0% | 89.3% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.80 | 63.0 | 6.63e-01 | 100.0% | 91.3% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.79 | 61.0 | 6.56e-01 | 100.0% | 92.3% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.79 | 59.0 | 6.26e-01 | 100.0% | 86.6% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.78 | 54.0 | 6.04e-01 | 100.0% | 90.6% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.78 | 59.0 | 6.32e-01 | 100.0% | 89.7% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 54.0 | 6.15e-01 | 99.4% | 100.0% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.73 | 56.0 | 5.66e-01 | 100.0% | 79.4% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 53.0 | 5.94e-01 | 100.0% | 96.2% |
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.72 | 49.0 | 5.82e-01 | 95.8% | 100.0% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.72 | 54.0 | 5.62e-01 | 100.0% | 83.2% |
| 1563850 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.71 | 55.0 | 5.64e-01 | 100.0% | 83.1% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.71 | 52.0 | 5.75e-01 | 100.0% | 96.2% |
| 3942477 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.70 | 57.0 | 5.79e-01 | 100.0% | 86.5% |
| 2074267 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 56.0 | 5.78e-01 | 100.0% | 88.7% |
| 5004308 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 55.0 | 5.71e-01 | 100.0% | 92.9% |
| 3597404 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.67 | 19.0 | 1.75e-01 | 100.0% | 18.7% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.66 | 43.0 | 5.04e-01 | 95.2% | 97.3% |
| 3590380 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 57.0 | 5.53e-01 | 100.0% | 84.4% |
| 4030848 | 1.1.13.52 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 | 0.63 | 53.0 | 5.35e-01 | 100.0% | 90.8% |
| 3886267 | 11.1.1.351 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD | 0.62 | 24.0 | 3.00e-01 | 80.7% | 54.0% |
| 3943681 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.61 | 51.0 | 5.37e-01 | 98.2% | 98.0% |
| 3556186 | 11.1.1.1028 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26737 | 0.60 | 25.0 | 3.24e-01 | 81.9% | 64.2% |
| 4131100 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.60 | 33.0 | 3.66e-01 | 91.0% | 65.2% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 52.0 | 4.91e-01 | 98.2% | 82.6% |
| 3513366 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 53.0 | 5.23e-01 | 100.0% | 95.4% |
| 4050380 | 1.1.7.95 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 | 0.58 | 31.0 | 3.86e-01 | 91.0% | 86.3% |
| 3716100 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.58 | 34.0 | 2.58e-01 | 100.0% | 24.5% |
| 4016470 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 24.0 | 2.88e-01 | 83.7% | 53.0% |
| 4324097 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.54 | 32.0 | 3.96e-01 | 100.0% | 97.0% |