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pre3_saliva_scaffold_3_prodigal-single.1__X__X__00056
Bact-Virpre3_saliva_scaffold_3_prodigal-single.1__X__X__00056
Identity
- Kingdom:
- phage
Quality
66.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 312-372
D2
high
residues 379-503
D3
high
residues 626-695
D4
high
residues 698-873
D5
medium
residues 1-132_234-295
Domain cluster:
rep: MF351863.1__ASR76073.1__PBI_BELLAMY_28__00026__D204-351_425-465
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12810.14 best | ALK_LTK_GRD | 42.4 | 1.20e-10 | 57.7% | 49.0% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zx5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 28.0 | 4.28e-01 | 97.9% | 95.2% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 30.0 | 4.44e-01 | 99.0% | 100.0% |
| 1y9qA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 31.0 | 4.37e-01 | 99.5% | 98.9% |
| 1tq5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 31.0 | 4.03e-01 | 98.5% | 85.2% |
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 29.0 | 3.85e-01 | 98.5% | 82.5% |
| 2gu9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 32.0 | 4.25e-01 | 100.0% | 100.0% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 31.0 | 3.96e-01 | 99.0% | 88.5% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 29.0 | 3.93e-01 | 97.9% | 92.2% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.55 | 29.0 | 3.88e-01 | 95.9% | 96.9% |
| 1g0dA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 29.0 | 3.71e-01 | 91.8% | 87.3% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 28.0 | 3.52e-01 | 94.8% | 83.9% |
| 7uzsX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 29.0 | 3.62e-01 | 94.8% | 87.0% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 30.0 | 3.47e-01 | 99.0% | 74.8% |
| 4a42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 29.0 | 3.48e-01 | 98.5% | 83.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1279880 | 10.12.1.22 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI | 0.58 | 31.0 | 3.78e-01 | 99.0% | 80.0% |
| 3282483 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 27.0 | 3.96e-01 | 87.6% | 100.0% |
| 3928274 | 10.4.1.27 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF29839 | 0.56 | 25.0 | 3.35e-01 | 96.9% | 78.0% |
| 5038652 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 31.0 | 4.08e-01 | 94.3% | 100.0% |
| 3932352 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.55 | 28.0 | 3.75e-01 | 99.0% | 90.5% |
| 5039010 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 34.0 | 4.02e-01 | 99.0% | 90.8% |
| 4002700 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.55 | 28.0 | 3.65e-01 | 99.0% | 86.4% |
| 3421268 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.55 | 26.0 | 3.43e-01 | 94.3% | 85.3% |
| 5047474 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 28.0 | 3.85e-01 | 92.8% | 100.0% |
| 3514837 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 28.0 | 3.50e-01 | 99.0% | 81.7% |
| 5053827 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 29.0 | 3.95e-01 | 93.3% | 100.0% |
| 3251815 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 29.0 | 3.56e-01 | 99.5% | 84.0% |
| 134743 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 29.0 | 3.63e-01 | 99.0% | 88.6% |
| 3928527 | 10.32.1.172 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like | 0.53 | 28.0 | 2.98e-01 | 97.4% | 55.0% |
| 5070709 | 11.1.1.237 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 | 0.52 | 25.0 | 3.21e-01 | 94.3% | 78.1% |
| 4220410 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.52 | 28.0 | 3.76e-01 | 96.4% | 100.0% |
| 5078262 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 28.0 | 3.64e-01 | 95.4% | 94.5% |
D6
medium
residues 133-233
D7
medium
residues 570-619