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pre3_saliva_scaffold_3_prodigal-single.1__X__X__00137
Bact-Virpre3_saliva_scaffold_3_prodigal-single.1__X__X__00137
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-176
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yv4A00 | 3.40.50.11030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Threonylcarbamoyl-AMP synthase, C-terminal domain | 0.67 | 39.0 | 4.89e-01 | 76.6% | 96.1% |
| 3ajeA02 | 3.40.50.11030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Threonylcarbamoyl-AMP synthase, C-terminal domain | 0.66 | 41.0 | 4.94e-01 | 81.7% | 94.0% |
| 3pg5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 47.0 | 3.96e-01 | 82.9% | 99.3% |
| 3votA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 34.0 | 4.33e-01 | 74.9% | 97.0% |
| 4b45A01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.58 | 45.0 | 4.25e-01 | 81.7% | 95.4% |
| 6s3eB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 4.22e-01 | 79.4% | 86.5% |
| 2lciA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 4.42e-01 | 82.9% | 93.3% |
| 3crmA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 4.71e-01 | 82.9% | 97.4% |
| 2l69A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 39.0 | 4.40e-01 | 82.3% | 94.0% |
| 3hb0D00 | 3.40.50.12350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 43.0 | 3.80e-01 | 81.7% | 91.8% |
| 3a8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 4.36e-01 | 82.9% | 98.3% |
| 1oywA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 31.0 | 3.52e-01 | 84.6% | 72.0% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 4.56e-01 | 84.0% | 95.7% |
| 3d3qA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 4.59e-01 | 82.3% | 98.7% |
| 1c9kB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 4.16e-01 | 81.1% | 100.0% |
| 1z5zB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 29.0 | 3.08e-01 | 70.9% | 56.8% |
| 2xdqA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 40.0 | 4.38e-01 | 76.6% | 100.0% |
| 3u4qB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 3.71e-01 | 76.6% | 84.9% |
| 1ihuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 3.64e-01 | 80.6% | 83.7% |
| 8amzP01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 32.0 | 2.50e-01 | 81.1% | 26.7% |
| 3pvsB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 34.0 | 3.61e-01 | 77.7% | 74.8% |
| 2ekdA00 | 3.40.50.11570 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 | 0.51 | 40.0 | 3.83e-01 | 82.9% | 87.1% |
| 4cgyA01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 3.89e-01 | 79.4% | 90.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3789330 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.63 | 53.0 | 4.08e-01 | 90.3% | 98.8% |
| 105488 | 2007.2.3.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase3 | 0.61 | 53.0 | 4.62e-01 | 93.7% | 86.2% |
| 3701198 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 47.0 | 4.17e-01 | 82.3% | 94.6% |
| 3612792 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 46.0 | 4.24e-01 | 81.1% | 97.4% |
| 4029325 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.60 | 47.0 | 3.92e-01 | 82.3% | 97.7% |
| 3559818 | 2007.2.3.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Myotub-related | 0.56 | 47.0 | 3.82e-01 | 91.4% | 95.1% |
| 3208069 | 7579.1.1.65 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF726 | 0.56 | 39.0 | 3.26e-01 | 70.9% | 85.6% |
| 4936551 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.56 | 43.0 | 4.04e-01 | 82.9% | 67.3% |
| 4048633 | 2004.1.1.71 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPPT | 0.55 | 43.0 | 3.94e-01 | 81.7% | 99.1% |
| 3164092 | 2004.1.1.140 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zeta_toxin | 0.55 | 32.0 | 3.57e-01 | 76.6% | 71.9% |
| 4247082 | 3949.1.1.1 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT | 0.55 | 43.0 | 3.85e-01 | 81.7% | 97.9% |
| 5005698 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.55 | 42.0 | 4.20e-01 | 79.4% | 78.9% |
| 4573342 | 2484.1.1.42 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_2 | 0.55 | 39.0 | 3.53e-01 | 71.4% | 92.8% |
| 5057660 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.54 | 41.0 | 3.55e-01 | 78.9% | 58.6% |
| 3593028 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 40.0 | 4.41e-01 | 77.1% | 95.2% |
| 3892447 | 2004.1.1.428 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 | 0.52 | 37.0 | 3.27e-01 | 71.4% | 60.0% |
| 4934577 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 40.0 | 3.34e-01 | 80.6% | 67.0% |
| 4571237 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.52 | 41.0 | 3.87e-01 | 87.4% | 67.4% |
| 3901619 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.52 | 43.0 | 3.46e-01 | 88.0% | 93.4% |
| 4567626 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 45.0 | 4.07e-01 | 96.0% | 100.0% |
| None | — | 0.51 | 36.0 | 3.84e-01 | 79.4% | 82.7% | |
| 1144578 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.51 | 39.0 | 3.90e-01 | 79.4% | 91.4% |
| 3469910 | 2007.2.3.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Myotub-related | 0.51 | 44.0 | 3.41e-01 | 94.3% | 75.9% |
| 4014878 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 42.0 | 3.40e-01 | 88.6% | 88.2% |
| 5014174 | 2006.1.3.9 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › OLD-like_TOPRIM | 0.50 | 30.0 | 3.49e-01 | 76.6% | 84.2% |