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pre3_saliva_scaffold_6_prodigal-single.1__X__X__00055
Bact-Virpre3_saliva_scaffold_6_prodigal-single.1__X__X__00055
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-38_213-225_237-358
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.62 | 37.0 | 3.93e-01 | 100.0% | 64.9% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 41.0 | 4.33e-01 | 99.4% | 79.2% |
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 35.0 | 3.45e-01 | 86.1% | 66.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3990193 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 41.0 | 3.99e-01 | 99.4% | 56.9% |
| 3596386 | 109.4.1.1774 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CFAP46_N | 0.52 | 36.0 | 3.77e-01 | 85.5% | 77.4% |
| 3847614 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 38.0 | 3.73e-01 | 90.8% | 68.7% |
| 3610156 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 33.0 | 3.66e-01 | 90.8% | 81.5% |
D2
medium
residues 39-212_226-236
Domain cluster:
rep: ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00151__D34-238
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i1tA02 | 3.30.70.2640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Arenavirus RNA polymerase | 0.54 | 20.0 | 2.82e-01 | 70.8% | 65.5% |
| 6at7B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.53 | 29.0 | 3.61e-01 | 78.9% | 86.9% |