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pre3_saliva_scaffold_6_prodigal-single.1__X__X__00116
Bact-Virpre3_saliva_scaffold_6_prodigal-single.1__X__X__00116
Identity
- Kingdom:
- phage
Quality
68.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 80-178
D2
medium
residues 179-309
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.56 | 40.0 | 3.86e-01 | 74.0% | 88.6% |
| 1p91B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 39.0 | 3.16e-01 | 81.7% | 85.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3194390 | 4.1.1.108 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D2_D3 | 0.54 | 33.0 | 3.67e-01 | 84.7% | 75.2% |
| 5051147 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.53 | 40.0 | 3.30e-01 | 78.6% | 91.3% |
| 3962295 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 38.0 | 3.13e-01 | 77.1% | 96.8% |