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pre3_saliva_scaffold_6_prodigal-single.1__X__X__00126
Bact-Virpre3_saliva_scaffold_6_prodigal-single.1__X__X__00126
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-222
Domain cluster:
rep: MZ333134.1__QXG07748.1__X__00016__D390-489
D2
medium
residues 1-81
Domain cluster:
rep: MZ501271.1__QZA71254.1__AH02_9__00009__D10-77
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kcqA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.60 | 45.0 | 3.66e-01 | 80.2% | 54.2% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.53 | 38.0 | 3.94e-01 | 75.3% | 94.5% |
| 3a1pB00 | 3.30.860.10 | Alpha Beta › 2-Layer Sandwich › 30s Ribosomal Protein S19; Chain A › Ribosomal protein S19/S15 | 0.52 | 35.0 | 3.54e-01 | 70.4% | 67.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3780130 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 38.0 | 3.29e-01 | 72.8% | 49.2% |
| 3706043 | 323.1.1.6 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf | 0.54 | 41.0 | 3.37e-01 | 84.0% | 50.6% |
| 4152359 | 2008.1.1.199 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_XamI | 0.54 | 49.0 | 3.38e-01 | 100.0% | 46.0% |
| 4178130 | 838.1.1.1 ↗ | a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 | 0.50 | 34.0 | 3.39e-01 | 70.4% | 64.4% |