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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00010
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00010
Identity
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-44_121-176
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5n9bA01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.70 | 56.0 | 4.45e-01 | 85.9% | 62.8% |
| 1iyxA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.69 | 61.0 | 5.00e-01 | 95.8% | 92.8% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 59.0 | 5.04e-01 | 100.0% | 67.5% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.66 | 55.0 | 4.08e-01 | 93.0% | 86.2% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 46.0 | 4.55e-01 | 73.2% | 73.3% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.66 | 54.0 | 4.21e-01 | 90.1% | 55.6% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 56.0 | 4.83e-01 | 97.2% | 80.9% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 50.0 | 4.61e-01 | 85.9% | 92.2% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.63 | 40.0 | 3.69e-01 | 97.2% | 49.5% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 48.0 | 5.08e-01 | 91.5% | 92.1% |
| 4bgjA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 53.0 | 4.61e-01 | 100.0% | 97.5% |
| 1qhlA00 | 3.40.1140.10 | Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › | 0.62 | 54.0 | 3.97e-01 | 100.0% | 41.4% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 53.0 | 4.33e-01 | 100.0% | 67.6% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.61 | 40.0 | 4.31e-01 | 91.5% | 81.4% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 46.0 | 4.47e-01 | 91.5% | 72.8% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 50.0 | 4.57e-01 | 98.6% | 84.0% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 50.0 | 4.23e-01 | 100.0% | 91.5% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 49.0 | 4.41e-01 | 98.6% | 81.7% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.32e-01 | 98.6% | 73.4% |
| 2qnuA00 | 3.40.1730.10 | Alpha Beta › 3-Layer(aba) Sandwich › pa0076 fold › pa0076 domain | 0.58 | 50.0 | 3.63e-01 | 98.6% | 63.0% |
| 3fh1A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 35.0 | 3.03e-01 | 100.0% | 35.2% |
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 48.0 | 3.88e-01 | 98.6% | 92.3% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 42.0 | 3.37e-01 | 81.7% | 78.9% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 47.0 | 4.51e-01 | 97.2% | 93.0% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 47.0 | 4.28e-01 | 98.6% | 91.4% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 45.0 | 4.55e-01 | 91.5% | 88.6% |
| 3ugfB02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.56 | 47.0 | 3.64e-01 | 98.6% | 45.2% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 37.0 | 3.59e-01 | 100.0% | 59.5% |
| 5da9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 2.64e-01 | 94.4% | 16.4% |
| 7kx7A03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 44.0 | 3.24e-01 | 94.4% | 33.0% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 45.0 | 4.42e-01 | 98.6% | 89.7% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.53 | 45.0 | 3.77e-01 | 94.4% | 64.2% |
| 3cygA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.53 | 45.0 | 3.89e-01 | 98.6% | 85.7% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 48.0 | 3.21e-01 | 100.0% | 32.3% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.37e-01 | 100.0% | 42.9% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 4.30e-01 | 97.2% | 94.5% |
| 4mj3B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 40.0 | 2.74e-01 | 88.7% | 84.4% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.51 | 46.0 | 3.68e-01 | 100.0% | 62.1% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.51 | 42.0 | 3.51e-01 | 97.2% | 50.7% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 39.0 | 3.32e-01 | 93.0% | 47.7% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.50 | 43.0 | 3.31e-01 | 100.0% | 40.4% |
| 4hiaA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 38.0 | 3.00e-01 | 87.3% | 38.1% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4661118 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.75 | 66.0 | 5.44e-01 | 97.2% | 91.2% |
| 3719166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 63.0 | 5.27e-01 | 98.6% | 79.2% |
| 3368394 | 4325.1.1.11 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF27041 | 0.71 | 52.0 | 4.78e-01 | 78.9% | 67.4% |
| 3499053 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.70 | 57.0 | 4.55e-01 | 87.3% | 53.3% |
| 5037168 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.70 | 60.0 | 5.04e-01 | 97.2% | 76.0% |
| 3941717 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.70 | 47.0 | 4.41e-01 | 100.0% | 56.8% |
| 3962269 | 2004.1.1.204 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 61.0 | 3.74e-01 | 98.6% | 16.0% |
| 4152544 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.69 | 58.0 | 4.48e-01 | 88.7% | 54.5% |
| 3864913 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.69 | 59.0 | 4.61e-01 | 95.8% | 89.7% |
| 3590584 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.69 | 57.0 | 4.53e-01 | 88.7% | 53.3% |
| 5076489 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 60.0 | 5.08e-01 | 97.2% | 67.0% |
| 5039455 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.68 | 46.0 | 3.90e-01 | 73.2% | 41.5% |
| 3275455 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.67 | 52.0 | 4.38e-01 | 84.5% | 55.0% |
| 3334339 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.66 | 57.0 | 3.86e-01 | 100.0% | 26.3% |
| 4958552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 53.0 | 4.56e-01 | 93.0% | 54.8% |
| 3957641 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.66 | 47.0 | 5.19e-01 | 77.5% | 98.2% |
| 146266 | 295.1.1.8 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 | 0.65 | 46.0 | 4.34e-01 | 73.2% | 65.5% |
| 3741279 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.65 | 54.0 | 4.40e-01 | 94.4% | 85.7% |
| 4680392 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.65 | 56.0 | 4.87e-01 | 97.2% | 80.9% |
| 4355655 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.65 | 52.0 | 4.29e-01 | 87.3% | 60.0% |
| 5064859 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.64 | 43.0 | 2.95e-01 | 70.4% | 94.2% |
| 3856046 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.64 | 51.0 | 4.18e-01 | 87.3% | 63.8% |
| 3808110 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.64 | 57.0 | 4.46e-01 | 100.0% | 59.3% |
| 3501270 | 2004.1.1.114 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MukB,SbcC_Walker_B | 0.64 | 56.0 | 3.48e-01 | 100.0% | 19.1% |
| 3443030 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 50.0 | 4.86e-01 | 87.3% | 82.5% |
| 5032193 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.63 | 53.0 | 4.64e-01 | 93.0% | 95.4% |
| 9690 | 2004.1.1.1172 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MukB, AAA_29 | 0.62 | 54.0 | 3.97e-01 | 100.0% | 41.4% |
| 3621723 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.62 | 47.0 | 3.22e-01 | 81.7% | 24.8% |
| 3614177 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 55.0 | 4.32e-01 | 100.0% | 88.7% |
| 4003463 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.62 | 47.0 | 3.90e-01 | 81.7% | 49.6% |
| 3206409 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 48.0 | 3.71e-01 | 84.5% | 39.4% |
| 5074611 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.61 | 51.0 | 4.93e-01 | 93.0% | 92.5% |
| 4529819 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.61 | 48.0 | 3.93e-01 | 85.9% | 88.9% |
| 3711707 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 54.0 | 4.30e-01 | 100.0% | 91.7% |
| 5032255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 4.53e-01 | 88.7% | 82.9% |
| 5057921 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.60 | 43.0 | 3.00e-01 | 95.8% | 21.8% |
| 5055184 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.60 | 43.0 | 4.12e-01 | 77.5% | 64.7% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.60 | 51.0 | 5.05e-01 | 95.8% | 92.0% |
| 3627862 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.60 | 47.0 | 3.67e-01 | 87.3% | 66.3% |
| 3698360 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 50.0 | 3.91e-01 | 98.6% | 73.5% |
| 4466001 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 44.0 | 3.65e-01 | 81.7% | 48.1% |
| 3488565 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.59 | 45.0 | 3.61e-01 | 84.5% | 45.3% |
| 376 | 2.1.1.20 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Phage_DNA_bind | 0.57 | 47.0 | 4.50e-01 | 97.2% | 92.0% |
| 5077400 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 39.0 | 3.55e-01 | 83.1% | 50.0% |
| 3709349 | 7504.1.1.0 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like | 0.57 | 46.0 | 3.46e-01 | 88.7% | 84.4% |
| 3283411 | 243.1.1.7 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N | 0.57 | 45.0 | 3.92e-01 | 95.8% | 56.4% |
| None | — | 0.57 | 50.0 | 3.02e-01 | 100.0% | 15.8% | |
| 3473974 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.56 | 47.0 | 3.80e-01 | 95.8% | 89.0% |
| 3445028 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 46.0 | 4.46e-01 | 91.5% | 81.2% |
| 3274239 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.56 | 49.0 | 4.23e-01 | 100.0% | 72.2% |
| 5046747 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.56 | 38.0 | 2.43e-01 | 70.4% | 97.3% |
| 3255424 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.56 | 47.0 | 3.66e-01 | 95.8% | 44.8% |
| 3439646 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.55 | 48.0 | 4.18e-01 | 97.2% | 63.8% |
| 5059871 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 3.33e-01 | 87.3% | 55.9% |
| 3761570 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.54 | 43.0 | 3.71e-01 | 91.5% | 53.9% |
| 3698492 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 44.0 | 3.62e-01 | 94.4% | 49.6% |
| 5018175 | 243.3.1.37 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4901 | 0.54 | 41.0 | 3.78e-01 | 90.1% | 62.1% |
| 3279764 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 44.0 | 4.49e-01 | 97.2% | 98.6% |
| 3783151 | 11.1.1.868 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26280 | 0.53 | 45.0 | 3.58e-01 | 93.0% | 90.3% |
| 4978131 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.53 | 45.0 | 3.11e-01 | 100.0% | 36.0% |
| 3595489 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 34.0 | 3.58e-01 | 78.9% | 81.7% |
D2
high
residues 48-119_182-229
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 30.0 | 3.94e-01 | 92.5% | 86.4% |
| 3t69A01 | 3.30.420.300 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain | 0.59 | 37.0 | 4.55e-01 | 97.5% | 100.0% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 37.0 | 3.64e-01 | 98.3% | 60.3% |
| 3h6eB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 40.0 | 4.35e-01 | 100.0% | 98.0% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 41.0 | 3.92e-01 | 99.2% | 74.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029815 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.70 | 45.0 | 3.72e-01 | 96.7% | 36.3% |
| 5033908 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.68 | 44.0 | 3.63e-01 | 96.7% | 37.6% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 26.0 | 3.46e-01 | 97.5% | 70.8% |
| 3174848 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.60 | 39.0 | 3.21e-01 | 98.3% | 36.7% |
| 3890539 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 26.0 | 3.49e-01 | 97.5% | 80.0% |
| 1245468 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.58 | 23.0 | 3.42e-01 | 95.8% | 95.2% |
| 3814983 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.57 | 35.0 | 4.29e-01 | 71.7% | 97.3% |
| 3337433 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.56 | 36.0 | 4.31e-01 | 99.2% | 97.5% |
| 3444038 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.54 | 36.0 | 4.20e-01 | 97.5% | 95.3% |
| 4110965 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.54 | 38.0 | 3.61e-01 | 98.3% | 62.1% |
| 4518527 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.52 | 41.0 | 4.21e-01 | 99.2% | 87.0% |
| 3741335 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.52 | 36.0 | 2.74e-01 | 71.7% | 46.8% |
| 5035417 | 3010.1.1.0 ↗ | a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains | 0.51 | 31.0 | 3.39e-01 | 98.3% | 74.7% |
| 5063667 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 37.0 | 3.94e-01 | 98.3% | 85.7% |
| 3621296 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 37.0 | 3.92e-01 | 97.5% | 85.2% |
| 4932086 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.50 | 36.0 | 3.11e-01 | 75.8% | 68.5% |