←Back to structures
pre3_saliva_scaffold_7_prodigal-single.1__X__X__00029
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00029
Identity
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-141
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.61 | 41.0 | 4.51e-01 | 82.5% | 84.7% |
| 1a5yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 47.0 | 3.78e-01 | 97.8% | 62.0% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 47.0 | 3.77e-01 | 97.8% | 58.7% |
| 1vm6A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 33.0 | 3.96e-01 | 86.9% | 100.0% |
| 4b3fX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 3.60e-01 | 97.8% | 67.7% |
| 1z6aA01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.51 | 47.0 | 4.07e-01 | 99.3% | 87.9% |
| 3fdjA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.51 | 38.0 | 3.90e-01 | 83.2% | 82.0% |
| 6vq6I01 | 3.30.2320.30 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › ATP synthase, E subunit, C-terminal | 0.51 | 35.0 | 3.84e-01 | 97.1% | 88.0% |
| 3lhlA00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.51 | 43.0 | 3.43e-01 | 92.0% | 64.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946199 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.66 | 30.0 | 4.05e-01 | 75.2% | 80.0% |
| 4990473 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.62 | 36.0 | 4.34e-01 | 93.4% | 87.8% |
| 3706905 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 32.0 | 3.95e-01 | 80.3% | 80.0% |
| 4965393 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.59 | 30.0 | 3.54e-01 | 78.1% | 70.0% |
| 3965587 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.58 | 33.0 | 4.15e-01 | 75.2% | 100.0% |
| 4999587 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.56 | 49.0 | 4.15e-01 | 95.6% | 90.7% |
| 4108225 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.55 | 31.0 | 3.17e-01 | 82.5% | 55.0% |
| 4513290 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.55 | 32.0 | 3.11e-01 | 85.4% | 51.0% |
| 3678300 | 2004.1.1.529 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 | 0.54 | 47.0 | 3.40e-01 | 95.6% | 54.6% |
| 4282818 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.53 | 38.0 | 3.90e-01 | 98.5% | 76.9% |
| 4971857 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 46.0 | 4.07e-01 | 97.1% | 75.6% |
| 4277215 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.52 | 38.0 | 3.62e-01 | 89.8% | 63.4% |
| 4048529 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.52 | 33.0 | 3.09e-01 | 84.7% | 52.1% |
| 3434443 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 3.04e-01 | 91.2% | 60.2% |
| 1125616 | 2485.1.1.57 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_17 | 0.51 | 29.0 | 3.45e-01 | 89.8% | 85.7% |
| 3705090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 31.0 | 3.62e-01 | 79.6% | 83.0% |
| None | — | 0.50 | 41.0 | 2.69e-01 | 90.5% | 26.9% |