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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00127

Bact-Vir

pre3_saliva_scaffold_7_prodigal-single.1__X__X__00127

Identity

Kingdom:
phage

Quality

92.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-96_246-278
PDB
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tv8B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 68.0 4.93e-01 100.0% 86.5%
2dfwA02 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.69 37.0 4.48e-01 72.9% 79.8%
7ch9L01 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.64 36.0 4.27e-01 72.1% 80.5%
4n03A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 42.0 3.79e-01 70.5% 88.6%
2i71A01 3.40.50.10640 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like 0.59 42.0 3.48e-01 72.9% 72.6%
2e2oA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 42.0 3.82e-01 73.6% 100.0%
5jicA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 41.0 3.62e-01 72.1% 89.0%
3qyfA01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.58 42.0 3.86e-01 74.4% 88.5%
3ls9A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 47.0 3.51e-01 86.8% 85.8%
3lyhA00 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 40.0 4.17e-01 71.3% 80.0%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 40.0 3.60e-01 73.6% 54.5%
2xvyA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 38.0 3.96e-01 72.1% 79.8%
4yo7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 38.0 3.82e-01 74.4% 70.0%
4do4A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 44.0 3.39e-01 86.0% 93.8%
4kq9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 37.0 4.18e-01 73.6% 90.8%
3pdiA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 38.0 3.64e-01 72.1% 66.2%
2xdqA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.54 39.0 3.87e-01 73.6% 75.7%
7s6eA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 38.0 3.84e-01 72.9% 70.1%
2vk2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 36.0 3.67e-01 72.9% 67.2%
2xdqB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.54 39.0 3.72e-01 73.6% 70.1%
6jdbA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 37.0 3.54e-01 71.3% 97.4%
3o3mD03 3.40.50.11900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 37.0 3.61e-01 72.1% 82.2%
3ijdA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.53 43.0 3.31e-01 86.8% 94.1%
3l6uA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 35.0 3.61e-01 72.9% 69.0%
2d5lA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 38.0 3.03e-01 74.4% 57.0%
2hu8A02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 37.0 3.01e-01 74.4% 44.1%
5hsgA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 35.0 3.61e-01 72.9% 70.4%
4hh3C02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.51 37.0 3.70e-01 74.4% 72.7%
1rliD00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.51 37.0 3.38e-01 74.4% 84.5%
2nlyA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.51 44.0 3.65e-01 91.5% 66.2%
1pjqA04 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.51 36.0 3.78e-01 72.9% 96.5%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 45.0 4.57e-01 99.2% 96.9%
2xwpA01 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 36.0 3.60e-01 72.9% 82.1%
4rxmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 38.0 3.84e-01 77.5% 86.8%
1yt8A02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.51 36.0 3.87e-01 93.0% 87.0%
1orvA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 36.0 2.95e-01 74.4% 46.5%
4irxA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 38.0 3.78e-01 78.3% 85.8%
7px8A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 36.0 2.90e-01 74.4% 55.2%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4671710 2007.1.18.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) › Radical_SAM 0.68 48.0 4.81e-01 73.6% 71.1%
4995727 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.67 56.0 4.42e-01 87.6% 100.0%
4978698 7539.1.1.1 a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase 0.61 44.0 3.53e-01 74.4% 50.2%
4961443 7539.1.1.1 a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase 0.60 44.0 3.57e-01 74.4% 54.6%
4326257 2006.1.3.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.59 39.0 4.13e-01 73.6% 75.2%
4270708 2006.1.3.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.59 43.0 4.23e-01 74.4% 71.1%
5024105 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.59 50.0 4.12e-01 89.1% 83.6%
4534978 2006.1.3.8 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4,RecR_C 0.58 42.0 4.30e-01 74.4% 78.4%
4972961 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.58 50.0 4.02e-01 89.9% 83.7%
None 0.58 49.0 4.08e-01 88.4% 94.3%
4009368 2007.1.14.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.56 41.0 3.44e-01 74.4% 59.2%
4975428 7576.1.1.0 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain 0.56 39.0 4.12e-01 72.1% 87.0%
5000067 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.56 51.0 4.07e-01 99.2% 88.6%
4980276 2007.1.14.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.55 40.0 3.39e-01 74.4% 80.0%
3717087 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 40.0 3.38e-01 74.4% 87.4%
None 0.55 44.0 3.35e-01 86.0% 89.2%
3178144 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.55 39.0 3.72e-01 73.6% 96.1%
4382601 2007.1.14.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.55 39.0 3.28e-01 74.4% 79.6%
4616971 2007.1.14.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro 0.54 39.0 3.66e-01 73.6% 66.5%
5051259 2007.1.14.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.54 39.0 3.28e-01 74.4% 60.1%
4439031 2007.1.14.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.54 39.0 3.29e-01 74.4% 60.8%
3269570 2007.1.4.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat 0.53 39.0 3.91e-01 74.4% 75.4%
3586885 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.53 37.0 3.42e-01 74.4% 55.2%
4945475 2007.1.4.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat 0.53 37.0 3.83e-01 72.9% 74.4%
4033896 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.53 38.0 3.12e-01 74.4% 43.3%
1507198 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.52 35.0 3.88e-01 73.6% 84.8%
3703764 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 38.0 3.30e-01 74.4% 78.4%
5011071 2005.1.1.32 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF5751 0.52 46.0 4.61e-01 98.4% 96.9%
3265697 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.52 47.0 3.73e-01 98.4% 82.4%
4956959 7539.1.1.1 a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase 0.52 43.0 3.56e-01 90.7% 65.4%
4234608 2007.1.14.6 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › CbiX 0.52 36.0 3.83e-01 72.1% 80.9%
4028904 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.52 45.0 3.77e-01 93.8% 96.7%
4008091 2003.1.1.26 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_hydro_4 0.51 46.0 4.00e-01 99.2% 86.0%
3362251 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.51 35.0 2.92e-01 73.6% 39.6%
4936551 2007.1.14.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.51 37.0 3.16e-01 74.4% 79.3%
4989007 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.51 45.0 4.34e-01 96.1% 97.2%
5081086 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.51 36.0 3.50e-01 73.6% 70.3%
5025903 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 35.0 3.26e-01 73.6% 55.8%
3706311 247.1.1.8 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_6 0.51 36.0 3.03e-01 74.4% 54.1%
1276806 7562.1.1.1 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic 0.50 36.0 3.56e-01 72.1% 92.5%
4015501 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.50 40.0 3.24e-01 85.3% 96.5%
3598487 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 41.0 3.70e-01 89.9% 94.1%
3689247 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.50 43.0 3.42e-01 93.0% 94.2%
D2 medium residues 97-245
PDB
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tv8B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.82 77.0 5.81e-01 100.0% 49.1%
3canA00 3.80.30.10 Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › pyruvate-formate lyase- activating enzyme 0.81 67.0 6.50e-01 98.0% 78.9%
4k36B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 68.0 5.01e-01 100.0% 44.8%
3rf9B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 64.0 5.06e-01 100.0% 49.0%
4jc0A03 3.30.750.200 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.68 50.0 5.48e-01 81.2% 94.2%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 42.0 4.23e-01 88.6% 61.6%
3g23A02 3.50.30.60 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like 0.64 42.0 4.93e-01 85.9% 94.3%
2ffjA03 3.40.50.10880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF01937, DUF89, domain 3 0.64 39.0 4.00e-01 73.8% 62.3%
7d88A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 58.0 4.38e-01 100.0% 54.8%
2chrA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.62 54.0 4.87e-01 100.0% 68.3%
3v3tA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.61 51.0 4.58e-01 88.6% 84.9%
6y9tB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 56.0 4.09e-01 100.0% 55.4%
5xd7A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.61 53.0 4.50e-01 100.0% 59.1%
2xkbL00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.61 53.0 3.93e-01 94.0% 88.4%
3raoB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.60 55.0 4.16e-01 100.0% 60.5%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 55.0 4.57e-01 100.0% 66.5%
1ivyB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 54.0 3.85e-01 99.3% 86.4%
2pljA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.59 54.0 4.68e-01 99.3% 68.6%
3ianA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 54.0 4.19e-01 100.0% 68.7%
8hi4A03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 48.0 4.28e-01 85.2% 97.1%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 54.0 4.49e-01 100.0% 62.0%
2x0kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 34.0 3.22e-01 87.9% 46.2%
2ph1A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 52.0 4.35e-01 99.3% 80.2%
1epuA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.57 40.0 4.29e-01 85.9% 84.4%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 38.0 4.07e-01 87.2% 79.5%
2x4gA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.11e-01 100.0% 91.1%
3s6dA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 4.20e-01 100.0% 68.9%
3of5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 51.0 4.53e-01 100.0% 94.5%
3io3A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 47.0 4.05e-01 89.3% 88.3%
5aunB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.28e-01 94.0% 91.0%
6fcxA01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.56 51.0 4.13e-01 100.0% 73.3%
4gieA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.55 50.0 4.07e-01 100.0% 56.2%
4kl0A00 3.90.245.10 Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like 0.55 46.0 3.52e-01 89.3% 90.0%
1yoeA00 3.90.245.10 Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like 0.55 50.0 3.98e-01 100.0% 94.7%
3iusB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 50.0 4.06e-01 100.0% 91.7%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 41.0 3.61e-01 83.2% 53.9%
3gjzA02 3.50.30.60 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like 0.54 41.0 3.94e-01 86.6% 69.2%
1sr8A03 3.40.50.10720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CbiD-like domains 0.54 33.0 4.09e-01 78.5% 100.0%
1byiA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 49.0 4.24e-01 99.3% 96.0%
1zl0B02 3.50.30.60 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like 0.53 41.0 4.22e-01 87.2% 86.3%
1eucB03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.53 44.0 4.51e-01 96.6% 93.2%
3ug7C00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 3.80e-01 100.0% 95.7%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 47.0 3.74e-01 100.0% 86.0%
5mn7A01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.52 48.0 4.63e-01 100.0% 95.2%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.85e-01 91.9% 70.7%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 46.0 3.94e-01 100.0% 90.6%
2cb9A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 45.0 4.30e-01 97.3% 93.1%
4s1wB02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.50 38.0 3.87e-01 87.2% 80.1%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 3.70e-01 89.3% 74.1%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5056316 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 79.0 5.83e-01 100.0% 58.6%
4975884 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.82 77.0 5.93e-01 100.0% 50.6%
4556622 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.82 77.0 5.90e-01 100.0% 49.8%
5031546 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.82 71.0 5.52e-01 100.0% 44.9%
198104 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.81 67.0 6.50e-01 98.0% 78.9%
4260578 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.81 77.0 5.97e-01 100.0% 51.5%
4338897 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.81 76.0 5.76e-01 100.0% 49.5%
4210104 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.81 76.0 5.75e-01 100.0% 49.2%
4532993 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.80 76.0 5.81e-01 100.0% 66.8%
4249063 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.80 76.0 5.72e-01 100.0% 63.7%
5047651 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.80 75.0 5.41e-01 100.0% 65.9%
3957000 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.80 75.0 5.25e-01 100.0% 56.1%
3508339 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.79 74.0 5.41e-01 100.0% 57.8%
4985797 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.79 69.0 5.69e-01 100.0% 54.5%
4945643 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.78 67.0 5.30e-01 98.7% 46.9%
5044430 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.78 72.0 5.83e-01 100.0% 56.4%
4941342 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 72.0 5.66e-01 100.0% 61.8%
4190564 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 71.0 5.10e-01 100.0% 44.7%
5035420 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.75 70.0 5.49e-01 100.0% 65.0%
4929206 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.75 71.0 5.30e-01 100.0% 46.9%
4988169 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.75 70.0 5.06e-01 100.0% 62.3%
5050361 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.75 69.0 4.98e-01 100.0% 38.5%
5032526 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.75 70.0 5.29e-01 100.0% 64.8%
5064319 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.74 70.0 5.23e-01 100.0% 47.1%
4960360 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.74 70.0 5.22e-01 100.0% 47.1%
5059056 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.74 69.0 5.31e-01 100.0% 48.8%
5005019 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 66.0 4.86e-01 100.0% 37.9%
4939087 2002.1.1.224 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM 0.73 65.0 5.50e-01 95.3% 65.0%
3283640 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.73 68.0 5.15e-01 100.0% 46.3%
5081167 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 68.0 4.87e-01 100.0% 45.2%
5053419 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 68.0 5.12e-01 100.0% 68.1%
4942944 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 68.0 5.05e-01 100.0% 45.4%
5033630 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 68.0 5.03e-01 100.0% 43.4%
5070796 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 68.0 5.07e-01 100.0% 49.3%
4935184 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 65.0 5.40e-01 96.6% 61.8%
5026080 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.71 66.0 5.25e-01 100.0% 67.9%
3976773 2002.1.1.126 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Radical_SAM_C 0.71 65.0 5.08e-01 99.3% 52.8%
5066534 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 66.0 5.47e-01 100.0% 60.0%
4971179 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.69 64.0 4.80e-01 100.0% 54.6%
4968541 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.65 61.0 4.70e-01 100.0% 60.6%
3622920 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 56.0 4.18e-01 100.0% 40.0%
4344398 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.62 54.0 4.51e-01 100.0% 56.3%
4342641 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.61 53.0 4.30e-01 94.6% 90.5%
4956097 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.60 54.0 4.46e-01 96.0% 97.2%
None 0.58 53.0 4.38e-01 99.3% 77.0%
5034730 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.58 52.0 4.36e-01 95.3% 97.9%
None 0.58 53.0 4.42e-01 99.3% 86.4%
3269595 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 45.0 4.18e-01 98.0% 64.7%
5051528 2004.1.1.85 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.58 52.0 4.04e-01 99.3% 86.4%
5001146 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.58 51.0 4.34e-01 95.3% 98.3%
4378077 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.57 52.0 4.53e-01 100.0% 94.2%
4028297 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.56 52.0 3.88e-01 100.0% 65.5%
4243335 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.56 52.0 4.46e-01 100.0% 89.6%
1562896 2004.1.1.437 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA, AAA_31 0.56 50.0 4.26e-01 96.0% 96.7%
4076745 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.56 51.0 4.48e-01 100.0% 91.6%
4339599 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.56 51.0 4.39e-01 100.0% 81.3%
5015405 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.56 51.0 4.68e-01 99.3% 89.5%
4165620 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.56 50.0 4.48e-01 100.0% 96.7%
3960953 2004.1.1.85 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.55 50.0 3.75e-01 100.0% 94.7%
None 0.55 50.0 3.90e-01 100.0% 84.5%
5059502 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.55 50.0 4.29e-01 100.0% 81.2%
4926904 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.55 51.0 4.37e-01 100.0% 82.2%
4272043 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.55 45.0 3.97e-01 87.2% 81.4%
5030395 7574.1.1.0 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) 0.55 45.0 4.48e-01 89.3% 92.5%
4057727 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.54 49.0 4.23e-01 100.0% 90.8%
5082498 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.54 50.0 5.04e-01 100.0% 99.3%
4084160 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.54 49.0 4.34e-01 100.0% 93.0%
4290247 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.54 49.0 4.18e-01 100.0% 89.6%
4344828 2004.1.1.85 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.54 48.0 3.86e-01 99.3% 97.0%
4109582 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.53 48.0 4.15e-01 100.0% 95.7%
5066245 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.53 48.0 3.95e-01 99.3% 87.8%
5000459 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.53 48.0 4.36e-01 100.0% 79.5%
3640010 7516.1.1.82 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Chitin_synth_2 0.53 40.0 2.99e-01 94.6% 31.6%
5057922 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.52 48.0 3.99e-01 100.0% 79.2%
4940918 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.52 47.0 3.96e-01 100.0% 77.6%
5066431 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.52 47.0 3.96e-01 100.0% 75.2%
5067162 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.51 46.0 3.97e-01 99.3% 90.0%
4994842 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.51 46.0 4.43e-01 96.6% 97.1%
4958686 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.51 46.0 4.06e-01 100.0% 95.0%