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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00325
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00325
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-235
Domain cluster:
rep: js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00148__D63-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04203.19 best | Sortase | 65.1 | 7.50e-18 | 67.2% | 98.4% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.91 | 73.0 | 7.92e-01 | 97.9% | 95.7% |
| 2kw8A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.90 | 71.0 | 7.85e-01 | 83.9% | 97.5% |
| 5go5A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.85 | 66.0 | 7.42e-01 | 91.7% | 100.0% |
| 1t2pA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.82 | 61.0 | 7.00e-01 | 86.5% | 100.0% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.81 | 58.0 | 6.65e-01 | 89.6% | 95.9% |
| 4d70A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.80 | 63.0 | 6.91e-01 | 88.5% | 96.2% |
| 4ux7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.78 | 59.0 | 5.83e-01 | 77.6% | 98.5% |
| 2w1kA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.75 | 69.0 | 6.76e-01 | 97.4% | 98.1% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.73 | 65.0 | 6.51e-01 | 92.2% | 99.5% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.72 | 66.0 | 6.33e-01 | 94.8% | 95.3% |
| 3psqB00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.69 | 59.0 | 6.12e-01 | 88.0% | 96.2% |
| 1ng5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.66 | 57.0 | 5.62e-01 | 90.1% | 96.1% |
| 4y4qA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.65 | 56.0 | 5.86e-01 | 89.1% | 97.7% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.58 | 27.0 | 3.45e-01 | 86.5% | 76.0% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 34.0 | 4.07e-01 | 88.5% | 93.5% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.55 | 32.0 | 3.46e-01 | 89.6% | 66.7% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 33.0 | 3.75e-01 | 85.9% | 85.7% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2879064 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.92 | 68.0 | 7.93e-01 | 79.7% | 100.0% |
| 4187781 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.90 | 85.0 | 8.13e-01 | 97.9% | 90.7% |
| 428579 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.89 | 63.0 | 7.48e-01 | 79.2% | 100.0% |
| 4135582 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.88 | 75.0 | 7.61e-01 | 91.1% | 88.9% |
| 3587540 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.87 | 67.0 | 7.28e-01 | 78.1% | 98.8% |
| 5024134 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.85 | 61.0 | 7.10e-01 | 76.6% | 99.3% |
| 153599 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.81 | 58.0 | 6.65e-01 | 89.6% | 95.9% |
| 2034294 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.81 | 70.0 | 7.23e-01 | 96.4% | 95.0% |
| 1566317 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.80 | 63.0 | 6.91e-01 | 88.5% | 96.2% |
| 4102870 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.80 | 67.0 | 6.23e-01 | 85.9% | 88.6% |
| 811 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.78 | 60.0 | 5.51e-01 | 78.1% | 91.1% |
| 2832652 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.77 | 69.0 | 7.00e-01 | 93.2% | 99.0% |
| 2129791 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.77 | 59.0 | 5.69e-01 | 77.6% | 100.0% |
| 4033467 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.76 | 64.0 | 6.63e-01 | 88.0% | 91.7% |
| 3587062 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.75 | 70.0 | 6.57e-01 | 96.9% | 92.0% |
| 4586448 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.75 | 63.0 | 6.56e-01 | 88.5% | 92.7% |
| 3589952 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.75 | 65.0 | 6.69e-01 | 95.8% | 93.5% |
| 169822 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.75 | 69.0 | 6.76e-01 | 97.4% | 98.1% |
| 2046344 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.74 | 67.0 | 6.53e-01 | 94.3% | 95.7% |
| 1842342 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.72 | 66.0 | 6.33e-01 | 94.8% | 95.3% |
| 154269 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.72 | 65.0 | 6.42e-01 | 94.3% | 94.1% |
| 2775426 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.71 | 63.0 | 6.27e-01 | 92.2% | 92.9% |
| 142114 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.68 | 57.0 | 5.87e-01 | 88.0% | 96.2% |
| 3942928 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.66 | 31.0 | 4.52e-01 | 82.3% | 98.8% |
| 1569000 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.65 | 56.0 | 5.86e-01 | 89.1% | 97.7% |
| 5032025 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 32.0 | 4.21e-01 | 70.8% | 86.7% |
| 3989121 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.61 | 26.0 | 3.75e-01 | 93.8% | 85.2% |
| 4947591 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.56 | 30.0 | 3.91e-01 | 72.4% | 87.8% |
| 4989918 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 31.0 | 3.98e-01 | 70.3% | 97.4% |
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 36.0 | 4.20e-01 | 97.9% | 97.8% |
| 5037458 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 32.0 | 4.01e-01 | 75.0% | 98.3% |
| 4931265 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 32.0 | 4.04e-01 | 74.0% | 100.0% |