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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00352
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00352
Identity
- Kingdom:
- phage
Quality
66.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-59
D2
high
residues 61-111
Domain cluster:
representative
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.80 | 64.0 | 4.99e-01 | 86.3% | 44.7% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.79 | 56.0 | 4.93e-01 | 78.4% | 52.1% |
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.79 | 56.0 | 4.85e-01 | 88.2% | 48.8% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.78 | 58.0 | 4.44e-01 | 96.1% | 34.4% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.74 | 62.0 | 5.47e-01 | 90.2% | 63.9% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.73 | 54.0 | 4.29e-01 | 84.3% | 37.8% |
| 4iw7A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.73 | 55.0 | 4.20e-01 | 86.3% | 36.5% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 60.0 | 5.06e-01 | 94.1% | 55.2% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 50.0 | 4.29e-01 | 82.4% | 45.9% |
| 2qyvA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.70 | 50.0 | 3.16e-01 | 94.1% | 15.2% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.69 | 51.0 | 4.64e-01 | 84.3% | 59.2% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.68 | 56.0 | 4.11e-01 | 98.0% | 42.8% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 55.0 | 4.82e-01 | 98.0% | 60.3% |
| 2pokA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.67 | 57.0 | 3.56e-01 | 98.0% | 38.9% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.66 | 51.0 | 3.73e-01 | 88.2% | 30.1% |
| 4kn7D01 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.66 | 52.0 | 3.92e-01 | 88.2% | 66.2% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.66 | 53.0 | 4.42e-01 | 92.2% | 49.0% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.66 | 48.0 | 2.89e-01 | 78.4% | 69.7% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.66 | 49.0 | 3.76e-01 | 88.2% | 32.8% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 53.0 | 4.53e-01 | 94.1% | 59.8% |
| 6zepA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.65 | 55.0 | 3.41e-01 | 100.0% | 31.7% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 44.0 | 3.24e-01 | 76.5% | 25.0% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.64 | 54.0 | 3.62e-01 | 98.0% | 23.8% |
| 4zm3B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 52.0 | 3.90e-01 | 96.1% | 43.0% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.64 | 44.0 | 4.07e-01 | 76.5% | 54.4% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.64 | 45.0 | 4.12e-01 | 76.5% | 55.7% |
| 6l2cB00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.64 | 51.0 | 3.05e-01 | 90.2% | 49.6% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 52.0 | 3.69e-01 | 100.0% | 59.6% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 50.0 | 3.96e-01 | 94.1% | 44.8% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 48.0 | 4.07e-01 | 90.2% | 48.4% |
| 2x5nA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.62 | 52.0 | 3.64e-01 | 96.1% | 51.4% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.62 | 50.0 | 3.74e-01 | 92.2% | 71.6% |
| 1ka8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 3.37e-01 | 70.6% | 63.0% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.61 | 45.0 | 3.43e-01 | 88.2% | 31.3% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 41.0 | 3.90e-01 | 84.3% | 56.1% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 52.0 | 3.44e-01 | 96.1% | 73.1% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.60 | 41.0 | 3.45e-01 | 84.3% | 37.6% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.60 | 49.0 | 3.84e-01 | 96.1% | 46.6% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 3.97e-01 | 88.2% | 62.8% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.59 | 45.0 | 4.05e-01 | 88.2% | 80.5% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 46.0 | 2.91e-01 | 98.0% | 82.9% |
| 3cxjA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 46.0 | 3.50e-01 | 100.0% | 41.7% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.05e-01 | 96.1% | 59.8% |
| 2ihyA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 2.54e-01 | 76.5% | 16.5% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.56 | 38.0 | 2.68e-01 | 72.5% | 40.6% |
| 1dqnA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 47.0 | 3.05e-01 | 96.1% | 36.1% |
| 1g38A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 42.0 | 2.83e-01 | 90.2% | 95.5% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 47.0 | 3.94e-01 | 98.0% | 58.6% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 47.0 | 3.70e-01 | 100.0% | 73.2% |
| 2axyA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 41.0 | 3.75e-01 | 88.2% | 66.7% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.38e-01 | 84.3% | 60.7% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 37.0 | 3.27e-01 | 78.4% | 90.1% |
| 6j0eB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.06e-01 | 84.3% | 45.3% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.24e-01 | 82.4% | 61.1% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 2.93e-01 | 96.1% | 62.0% |
| 2jigA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 39.0 | 2.74e-01 | 92.2% | 77.7% |
| 3duzA03 | 6.10.250.3010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 44.0 | 3.83e-01 | 96.1% | 64.9% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 36.0 | 3.25e-01 | 80.4% | 72.5% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.50 | 36.0 | 2.55e-01 | 82.4% | 92.4% |
| 2pmbA01 | 3.30.1850.10 | Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like | 0.50 | 39.0 | 3.30e-01 | 96.1% | 61.7% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979942 | 304.103.1.13 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Fer4_16 | 0.81 | 68.0 | 4.35e-01 | 90.2% | 40.0% |
| 3950275 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.80 | 60.0 | 5.01e-01 | 84.3% | 48.2% |
| 4971145 | 304.103.1.13 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Fer4_16 | 0.78 | 65.0 | 4.16e-01 | 90.2% | 37.3% |
| 4945934 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 64.0 | 4.81e-01 | 88.2% | 41.7% |
| 3948373 | 304.8.1.69 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › YejG | 0.77 | 60.0 | 4.66e-01 | 88.2% | 39.4% |
| 5049454 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.77 | 63.0 | 3.81e-01 | 90.2% | 28.1% |
| 4419954 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.75 | 61.0 | 5.61e-01 | 88.2% | 72.3% |
| 4177037 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.74 | 53.0 | 5.17e-01 | 74.5% | 69.1% |
| 3619798 | 3122.1.1.1 ↗ | a+b complex topology › MESD › MESD › MESD › Mesd | 0.73 | 60.0 | 4.42e-01 | 94.1% | 35.4% |
| 4057766 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.73 | 45.0 | 3.23e-01 | 82.4% | 22.1% |
| 4616680 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.72 | 54.0 | 3.25e-01 | 84.3% | 11.5% |
| 5035783 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.72 | 57.0 | 4.97e-01 | 96.1% | 57.5% |
| 3972855 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.72 | 59.0 | 5.14e-01 | 88.2% | 60.0% |
| 3850744 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.71 | 53.0 | 4.80e-01 | 80.4% | 64.3% |
| 5029669 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 48.0 | 3.59e-01 | 70.6% | 55.0% |
| 3252212 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.71 | 56.0 | 4.93e-01 | 86.3% | 61.3% |
| 1036625 | 3122.1.1.1 ↗ | a+b complex topology › MESD › MESD › MESD › Mesd | 0.71 | 59.0 | 5.10e-01 | 92.2% | 60.3% |
| 4416593 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.71 | 57.0 | 4.78e-01 | 96.1% | 52.2% |
| 3957864 | 881.1.1.17 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3710 | 0.69 | 50.0 | 3.51e-01 | 86.3% | 23.5% |
| 3816635 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.69 | 53.0 | 3.78e-01 | 84.3% | 36.7% |
| 5048344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 50.0 | 4.45e-01 | 80.4% | 55.7% |
| 3723045 | 304.51.1.18 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF28298 | 0.68 | 54.0 | 4.36e-01 | 98.0% | 44.9% |
| 3599479 | 3910.1.1.1 ↗ | extended segments › Exosome complex exonuclease RRP6 N-terminal domain › Exosome complex exonuclease RRP6 N-terminal domain › Exosome complex exonuclease RRP6 N-terminal domain › PMC2NT | 0.68 | 60.0 | 4.82e-01 | 100.0% | 62.0% |
| 4932448 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.67 | 53.0 | 4.50e-01 | 90.2% | 51.1% |
| 5046112 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.67 | 58.0 | 3.77e-01 | 96.1% | 97.3% |
| 4443601 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.67 | 52.0 | 4.48e-01 | 88.2% | 57.6% |
| 3413434 | 309.1.1.6 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C,Peptidase_M16_M | 0.67 | 56.0 | 3.60e-01 | 96.1% | 22.4% |
| 2323881 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.67 | 51.0 | 5.05e-01 | 90.2% | 81.5% |
| 3259742 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.67 | 48.0 | 4.34e-01 | 88.2% | 54.7% |
| 4009409 | 109.4.1.2353 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HemY_N, TPR_2 | 0.66 | 53.0 | 3.11e-01 | 86.3% | 14.6% |
| 4974340 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.66 | 44.0 | 4.31e-01 | 70.6% | 63.6% |
| 3332318 | 331.2.1.11 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › COR-B | 0.66 | 47.0 | 3.25e-01 | 90.2% | 21.1% |
| 4034165 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.66 | 50.0 | 3.58e-01 | 80.4% | 62.1% |
| 2161921 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.66 | 54.0 | 4.65e-01 | 96.1% | 56.5% |
| 3235469 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.66 | 55.0 | 3.61e-01 | 98.0% | 23.3% |
| 3941779 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.65 | 52.0 | 3.67e-01 | 96.1% | 27.4% |
| 4943839 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.65 | 47.0 | 3.09e-01 | 78.4% | 77.9% |
| 3965667 | 109.4.1.520 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HemY_N | 0.64 | 51.0 | 2.99e-01 | 86.3% | 14.8% |
| 3800640 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.64 | 54.0 | 2.99e-01 | 100.0% | 9.5% |
| 4975579 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.63 | 50.0 | 3.60e-01 | 90.2% | 35.5% |
| 4600303 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.63 | 48.0 | 4.34e-01 | 96.1% | 58.7% |
| 3980132 | 823.1.1.1 ↗ | a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › gpW | 0.63 | 43.0 | 4.20e-01 | 76.5% | 65.5% |
| 3340747 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.61 | 46.0 | 3.08e-01 | 90.2% | 18.8% |
| 3800478 | 304.28.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Patched | 0.61 | 49.0 | 2.76e-01 | 100.0% | 12.6% |
| 5025623 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.61 | 46.0 | 4.11e-01 | 98.0% | 55.0% |
| 5017355 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.61 | 48.0 | 3.09e-01 | 90.2% | 21.5% |
| 4226064 | 3433.1.2.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain | 0.61 | 44.0 | 4.55e-01 | 80.4% | 97.8% |
| 3987356 | 3067.1.1.1 ↗ | few secondary structure elements › N-terminal domain of helicase-loading protein DnaI › N-terminal domain of helicase-loading protein DnaI › N-terminal domain of helicase-loading protein DnaI › DnaI_N | 0.60 | 49.0 | 4.31e-01 | 98.0% | 68.2% |
| 4932057 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.60 | 46.0 | 4.03e-01 | 96.1% | 55.0% |
| 3942543 | 101.1.2.43 ↗ | alpha arrays › HTH › HTH › winged helix domain › Pox_D5 | 0.60 | 40.0 | 3.18e-01 | 70.6% | 57.3% |
| 5078195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 44.0 | 3.93e-01 | 80.4% | 54.7% |
| 4990978 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 48.0 | 3.78e-01 | 100.0% | 90.0% |
| 4563894 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.60 | 47.0 | 4.06e-01 | 98.0% | 54.1% |
| 3810963 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 45.0 | 3.29e-01 | 90.2% | 27.5% |
| 5082030 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 52.0 | 3.33e-01 | 100.0% | 43.1% |
| 3208120 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.59 | 51.0 | 3.69e-01 | 100.0% | 74.2% |
| 3220364 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.59 | 47.0 | 3.10e-01 | 90.2% | 22.0% |
| 4999182 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 4.00e-01 | 92.2% | 57.3% |
| 3710982 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.58 | 42.0 | 2.65e-01 | 76.5% | 28.4% |
| 3673110 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.58 | 39.0 | 4.25e-01 | 70.6% | 92.5% |
| 3600149 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.58 | 49.0 | 4.02e-01 | 98.0% | 100.0% |
| 3989090 | 312.1.1.1 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf | 0.58 | 41.0 | 2.88e-01 | 78.4% | 25.3% |
| 5057781 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.58 | 45.0 | 3.99e-01 | 98.0% | 56.2% |
| 3614153 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.58 | 46.0 | 3.07e-01 | 98.0% | 58.4% |
| 4123638 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.58 | 51.0 | 3.38e-01 | 100.0% | 25.7% |
| 4156356 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.58 | 46.0 | 3.90e-01 | 98.0% | 51.1% |
| 3786028 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.57 | 43.0 | 3.08e-01 | 80.4% | 44.1% |
| 2534285 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.57 | 44.0 | 3.30e-01 | 84.3% | 55.8% |
| 3909510 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 47.0 | 2.90e-01 | 100.0% | 80.3% |
| 4940513 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.57 | 46.0 | 3.86e-01 | 98.0% | 51.1% |
| 4981754 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.56 | 46.0 | 4.09e-01 | 94.1% | 69.3% |
| 4791706 | 304.126.1.4 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I_N | 0.55 | 39.0 | 3.66e-01 | 88.2% | 56.8% |
| 3955679 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.55 | 46.0 | 3.89e-01 | 96.1% | 57.8% |
| 3587898 | 101.1.2.214 ↗ | alpha arrays › HTH › HTH › winged helix domain › DnaD_N | 0.55 | 45.0 | 3.46e-01 | 92.2% | 41.7% |
| 4941846 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.54 | 47.0 | 4.16e-01 | 98.0% | 72.0% |
| 3588857 | 101.1.2.93 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Mga | 0.54 | 44.0 | 3.79e-01 | 94.1% | 56.5% |
| 3708820 | 7581.1.1.22 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt | 0.54 | 44.0 | 2.70e-01 | 90.2% | 30.3% |
| 5027863 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.53 | 45.0 | 3.92e-01 | 96.1% | 66.3% |
| 3957133 | 7581.1.1.22 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt | 0.51 | 44.0 | 2.92e-01 | 98.0% | 49.5% |