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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00354
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00354
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-236
Domain cluster:
rep: js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00148__D63-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04203.19 best | Sortase | 93.9 | 8.90e-27 | 67.0% | 100.0% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.98 | 77.0 | 8.38e-01 | 80.3% | 93.3% |
| 2kw8A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.89 | 73.0 | 7.95e-01 | 87.8% | 99.4% |
| 5go5A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.84 | 67.0 | 7.45e-01 | 95.2% | 100.0% |
| 4d70A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.84 | 64.0 | 7.00e-01 | 92.0% | 91.9% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.82 | 61.0 | 6.86e-01 | 92.6% | 95.9% |
| 1t2pA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.81 | 61.0 | 6.96e-01 | 90.4% | 99.3% |
| 4ux7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.77 | 60.0 | 5.81e-01 | 79.8% | 98.5% |
| 2w1kA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.76 | 73.0 | 7.03e-01 | 100.0% | 93.8% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.73 | 68.0 | 6.75e-01 | 95.7% | 95.4% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.73 | 69.0 | 6.56e-01 | 98.4% | 92.1% |
| 3psqB00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.66 | 59.0 | 6.00e-01 | 91.5% | 96.7% |
| 4y4qA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.65 | 57.0 | 5.95e-01 | 93.1% | 98.3% |
| 1ng5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.64 | 58.0 | 5.59e-01 | 93.6% | 88.3% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 35.0 | 3.86e-01 | 93.1% | 72.8% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.53 | 32.0 | 3.39e-01 | 92.6% | 66.0% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.53 | 26.0 | 3.29e-01 | 91.5% | 77.9% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 38.0 | 4.13e-01 | 80.3% | 90.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4187781 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.97 | 94.0 | 8.90e-01 | 100.0% | 86.0% |
| 2879064 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.95 | 71.0 | 8.20e-01 | 79.3% | 99.3% |
| 4135582 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.92 | 79.0 | 7.93e-01 | 94.7% | 87.4% |
| 3587540 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.89 | 71.0 | 7.65e-01 | 81.4% | 99.4% |
| 428579 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.88 | 63.0 | 7.42e-01 | 80.3% | 100.0% |
| 4953572 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.86 | 61.0 | 7.22e-01 | 98.9% | 99.3% |
| 5024134 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.85 | 62.0 | 7.26e-01 | 78.2% | 100.0% |
| 1566317 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.84 | 64.0 | 7.00e-01 | 92.0% | 91.9% |
| 153599 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.82 | 61.0 | 6.86e-01 | 92.6% | 95.9% |
| 4033467 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.81 | 66.0 | 6.83e-01 | 91.5% | 87.2% |
| 2034294 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.81 | 70.0 | 7.20e-01 | 97.9% | 93.3% |
| 4102870 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.80 | 69.0 | 6.37e-01 | 88.3% | 89.9% |
| 2832652 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.79 | 75.0 | 7.44e-01 | 97.3% | 100.0% |
| 3589952 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.79 | 68.0 | 6.94e-01 | 99.5% | 90.3% |
| 4586448 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.78 | 64.0 | 6.59e-01 | 92.0% | 88.8% |
| 3587062 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.77 | 74.0 | 6.87e-01 | 99.5% | 88.4% |
| 169822 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.76 | 73.0 | 7.03e-01 | 100.0% | 93.8% |
| 1842342 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.73 | 69.0 | 6.56e-01 | 98.4% | 92.1% |
| 2046344 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.72 | 70.0 | 6.70e-01 | 99.5% | 97.1% |
| 2775426 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.72 | 65.0 | 6.38e-01 | 93.1% | 88.4% |
| 154269 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.72 | 68.0 | 6.59e-01 | 97.9% | 90.6% |
| 2129791 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.69 | 61.0 | 5.85e-01 | 92.0% | 86.3% |
| 142114 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.66 | 58.0 | 5.92e-01 | 91.5% | 96.8% |
| 1569000 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.65 | 57.0 | 5.95e-01 | 93.1% | 98.3% |
| 3942928 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 31.0 | 4.46e-01 | 86.7% | 100.0% |
| 5037458 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 33.0 | 4.02e-01 | 71.8% | 98.3% |
| 3060721 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.50 | 25.0 | 3.36e-01 | 89.9% | 100.0% |