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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00364
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00364
Identity
- Kingdom:
- phage
Quality
71.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 421-684
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08363.17 best | GbpC | 146.9 | 1.10e-42 | 96.6% | 93.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jmmA02 | 2.60.530.10 | Mainly Beta › Sandwich › Major cell-surface adhesin PAc › Major cell-surface adhesin PAc | 0.92 | 89.0 | 8.05e-01 | 99.2% | 99.4% |
| 6gedA01 | 2.60.530.10 | Mainly Beta › Sandwich › Major cell-surface adhesin PAc › Major cell-surface adhesin PAc | 0.90 | 81.0 | 7.95e-01 | 93.2% | 100.0% |
| 2wd6A00 | 2.60.530.10 | Mainly Beta › Sandwich › Major cell-surface adhesin PAc › Major cell-surface adhesin PAc | 0.83 | 81.0 | 7.67e-01 | 100.0% | 93.0% |
| 2pn5A08 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 27.0 | 4.12e-01 | 94.7% | 90.1% |
| 2vqaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 27.0 | 3.23e-01 | 72.3% | 58.2% |
| 5lz6A00 | 2.60.120.680 | Mainly Beta › Sandwich › Jelly Rolls › GOLD domain | 0.61 | 29.0 | 4.10e-01 | 98.9% | 92.9% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 36.0 | 4.53e-01 | 94.7% | 96.9% |
| 5z06A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.58 | 39.0 | 4.63e-01 | 93.9% | 100.0% |
| 3kptA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 29.0 | 3.95e-01 | 93.6% | 89.4% |
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 29.0 | 4.05e-01 | 76.9% | 100.0% |
| 4es8B01 | 2.60.120.1240 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 42.0 | 4.80e-01 | 95.1% | 99.5% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 22.0 | 3.38e-01 | 94.7% | 87.5% |
| 4b60A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 30.0 | 3.86e-01 | 90.5% | 91.0% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 28.0 | 3.73e-01 | 89.4% | 89.9% |
| 2zoeB02 | 2.60.120.1080 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 26.0 | 3.37e-01 | 96.6% | 77.0% |
| 1uunA01 | 2.60.40.1650 | Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) | 0.53 | 27.0 | 3.57e-01 | 70.8% | 90.2% |
| 3njzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 32.0 | 2.97e-01 | 87.5% | 45.1% |
| 1y3tA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 30.0 | 3.67e-01 | 71.2% | 87.6% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 28.0 | 3.60e-01 | 86.7% | 94.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4351448 | 12.4.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) | 0.92 | 90.0 | 6.67e-01 | 100.0% | 58.1% |
| 2644349 | 12.4.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) | 0.92 | 90.0 | 7.54e-01 | 100.0% | 83.4% |
| 2651848 | 12.4.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) › GbpC | 0.92 | 90.0 | 7.66e-01 | 100.0% | 86.9% |
| 4579322 | 12.4.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) | 0.91 | 89.0 | 7.43e-01 | 100.0% | 71.0% |
| 2163906 | 12.4.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) › GbpC | 0.90 | 87.0 | 7.68e-01 | 98.9% | 83.9% |
| 2387859 | 12.4.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) › GbpC | 0.88 | 84.0 | 7.85e-01 | 98.9% | 94.9% |
| 4440403 | 12.4.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) | 0.83 | 81.0 | 5.65e-01 | 100.0% | 39.4% |
| 2740189 | 12.4.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) › GbpC | 0.83 | 81.0 | 7.63e-01 | 100.0% | 91.8% |
| 4559850 | 12.4.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) | 0.83 | 80.0 | 6.28e-01 | 100.0% | 56.9% |
| 5009955 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 31.0 | 4.74e-01 | 92.8% | 100.0% |
| 4241505 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.66 | 29.0 | 4.41e-01 | 72.0% | 100.0% |
| 3231707 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 32.0 | 4.61e-01 | 72.3% | 100.0% |
| 3647638 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.58 | 26.0 | 3.76e-01 | 92.4% | 88.8% |
| 5050549 | 10.1.1.46 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › InhA-like_MAM | 0.56 | 30.0 | 3.61e-01 | 89.0% | 76.0% |
| 3230709 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 39.0 | 4.32e-01 | 86.7% | 100.0% |
D2
high
residues 927-1110
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00105__D671-754_799-883
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17998.8 best | AgI_II_C2 | 73.5 | 3.60e-20 | 94.0% | 100.0% |
D3
high
residues 1114-1221_1245-1335
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00364__D1343-1442_1502-1569
D4
high
residues 1343-1442_1502-1569
Domain cluster:
representative
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kptA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.83 | 59.0 | 6.42e-01 | 100.0% | 86.5% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.79 | 58.0 | 6.31e-01 | 100.0% | 88.8% |
| 4hsqA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.77 | 56.0 | 6.03e-01 | 100.0% | 86.1% |
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.77 | 61.0 | 6.45e-01 | 98.8% | 91.9% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.75 | 59.0 | 6.10e-01 | 100.0% | 86.0% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.73 | 60.0 | 6.25e-01 | 100.0% | 92.3% |
| 1x1iA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.72 | 34.0 | 4.03e-01 | 82.1% | 62.7% |
| 3uxfA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 58.0 | 5.88e-01 | 100.0% | 84.9% |
| 2vo8A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 48.0 | 5.33e-01 | 100.0% | 86.7% |
| 4p0dA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 55.0 | 5.53e-01 | 100.0% | 82.4% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 45.0 | 5.17e-01 | 100.0% | 91.8% |
| 3pf2A01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 58.0 | 5.80e-01 | 100.0% | 87.4% |
| 8afoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 33.0 | 4.49e-01 | 100.0% | 89.8% |
| 7y8sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 34.0 | 4.37e-01 | 100.0% | 84.2% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 49.0 | 5.22e-01 | 100.0% | 89.7% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 53.0 | 5.55e-01 | 99.4% | 92.9% |
| 1pmiA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 38.0 | 4.41e-01 | 83.3% | 81.5% |
| 1p8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 45.0 | 4.98e-01 | 100.0% | 91.7% |
| 4h3wA01 | 2.60.290.20 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › Protein of unknown function (DUF4621), C-terminal domain | 0.63 | 46.0 | 5.15e-01 | 96.4% | 100.0% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 45.0 | 4.88e-01 | 100.0% | 89.1% |
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.63 | 45.0 | 4.33e-01 | 97.6% | 65.2% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 44.0 | 4.92e-01 | 99.4% | 95.3% |
| 3thdA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 44.0 | 4.75e-01 | 95.2% | 88.3% |
| 5dcaA08 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.62 | 36.0 | 4.37e-01 | 100.0% | 88.2% |
| 3kd4A01 | 2.60.40.3140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 46.0 | 4.28e-01 | 97.6% | 63.0% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 36.0 | 4.43e-01 | 83.3% | 94.2% |
| 1hx6A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 44.0 | 4.82e-01 | 75.6% | 90.8% |
| 8a28A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 45.0 | 4.82e-01 | 100.0% | 93.7% |
| 5m59A06 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.59 | 35.0 | 4.12e-01 | 99.4% | 85.7% |
| 2gysA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 32.0 | 4.23e-01 | 100.0% | 95.8% |
| 8ediA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 32.0 | 4.14e-01 | 94.6% | 95.6% |
| 3hn3D01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 54.0 | 5.09e-01 | 100.0% | 90.9% |
| 7rskA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 35.0 | 4.24e-01 | 100.0% | 91.7% |
| 7ox5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 32.0 | 3.99e-01 | 100.0% | 88.3% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 41.0 | 4.62e-01 | 100.0% | 97.7% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 30.0 | 3.97e-01 | 78.0% | 97.7% |
| 1ie5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 33.0 | 3.93e-01 | 81.0% | 86.9% |
| 4a7kA02 | 2.60.120.990 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.62e-01 | 82.1% | 97.3% |
| 4lr4A01 | 2.60.120.1420 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 4.23e-01 | 79.2% | 89.8% |
| 3demA03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.55 | 35.0 | 4.00e-01 | 100.0% | 90.4% |
| 1va9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 31.0 | 3.48e-01 | 99.4% | 71.3% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.54 | 36.0 | 4.26e-01 | 97.0% | 100.0% |
| 1cx1A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 4.55e-01 | 100.0% | 93.5% |
| 3k4zA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 46.0 | 4.71e-01 | 100.0% | 95.7% |
| 1sfpA00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.54 | 35.0 | 4.18e-01 | 99.4% | 99.1% |
| 3kq4B04 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.54 | 36.0 | 4.16e-01 | 95.8% | 100.0% |
| 3vgiA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 48.0 | 4.17e-01 | 99.4% | 89.6% |
| 3f95B00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.54 | 47.0 | 4.66e-01 | 100.0% | 91.3% |
| 3ammA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 48.0 | 4.25e-01 | 100.0% | 93.7% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 48.0 | 4.75e-01 | 99.4% | 93.9% |
| 2q1mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 35.0 | 4.07e-01 | 100.0% | 95.7% |
| 4w8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 42.0 | 4.37e-01 | 100.0% | 89.7% |
| 4gwmB03 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.53 | 39.0 | 4.02e-01 | 100.0% | 79.3% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.53 | 32.0 | 3.84e-01 | 83.3% | 93.3% |
| 4ae2B02 | 2.60.120.1000 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 4.61e-01 | 100.0% | 94.1% |
| 2zoeB02 | 2.60.120.1080 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 39.0 | 4.05e-01 | 96.4% | 84.2% |
| 1k42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 4.75e-01 | 100.0% | 97.6% |
| 4wgkA02 | 2.60.40.2300 | Mainly Beta › Sandwich › Immunoglobulin-like › Neutral/alkaline non-lysosomal ceramidase, C-terminal domain | 0.52 | 37.0 | 4.04e-01 | 85.1% | 90.2% |
| 2dduA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 4.48e-01 | 100.0% | 96.8% |
| 3abzA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.66e-01 | 99.4% | 98.8% |
| 1f97A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.90e-01 | 83.3% | 98.1% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 4.40e-01 | 100.0% | 98.5% |
| 2p3yA04 | 2.60.120.600 | Mainly Beta › Sandwich › Jelly Rolls › Domain of unknown function DUF1214, C-terminal domain | 0.51 | 46.0 | 4.57e-01 | 99.4% | 96.0% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 46.0 | 4.10e-01 | 100.0% | 73.2% |
| 1i3pA00 | 2.60.250.10 | Mainly Beta › Sandwich › Baculovirus p35 › Baculovirus p35 | 0.50 | 45.0 | 3.83e-01 | 97.0% | 59.9% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1070070 | 11.1.5.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sgo0707_N2 | 0.79 | 58.0 | 6.23e-01 | 100.0% | 86.4% |
| 3590065 | 11.1.5.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 | 0.79 | 61.0 | 6.51e-01 | 100.0% | 90.0% |
| 2983651 | 11.1.5.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 | 0.77 | 62.0 | 6.43e-01 | 100.0% | 89.1% |
| 3609295 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.73 | 45.0 | 5.31e-01 | 100.0% | 88.7% |
| 3659911 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 48.0 | 4.84e-01 | 100.0% | 66.5% |
| 3460800 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.72 | 49.0 | 5.20e-01 | 100.0% | 77.3% |
| 3569095 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.72 | 49.0 | 5.55e-01 | 100.0% | 92.0% |
| 3831628 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 47.0 | 5.09e-01 | 100.0% | 77.9% |
| 4198149 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.71 | 57.0 | 5.77e-01 | 100.0% | 82.9% |
| 1789283 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.71 | 48.0 | 5.08e-01 | 100.0% | 77.0% |
| 3438248 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.70 | 49.0 | 5.01e-01 | 100.0% | 73.8% |
| 4011072 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 48.0 | 4.94e-01 | 100.0% | 72.5% |
| 2323933 | 10.32.1.58 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BPA_C | 0.69 | 46.0 | 5.16e-01 | 100.0% | 87.5% |
| 1347546 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.69 | 55.0 | 5.54e-01 | 100.0% | 82.8% |
| 5010649 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.68 | 37.0 | 4.86e-01 | 100.0% | 98.9% |
| 1826895 | 10.32.1.58 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BPA_C | 0.68 | 45.0 | 5.15e-01 | 100.0% | 91.1% |
| 4954605 | 10.1.2.186 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 | 0.68 | 46.0 | 5.21e-01 | 100.0% | 92.0% |
| 5039890 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.67 | 51.0 | 5.37e-01 | 100.0% | 88.0% |
| 3425735 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.65 | 46.0 | 4.83e-01 | 100.0% | 80.7% |
| 3916306 | 10.32.1.179 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_C | 0.64 | 39.0 | 4.75e-01 | 96.4% | 95.2% |
| 4962830 | 10.1.2.197 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF7263 | 0.64 | 35.0 | 4.45e-01 | 100.0% | 91.6% |
| 3731316 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 42.0 | 4.99e-01 | 85.1% | 100.0% |
| 3931991 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 41.0 | 4.84e-01 | 84.5% | 93.9% |
| 3996582 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.64 | 45.0 | 4.97e-01 | 100.0% | 90.4% |
| 5039365 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 48.0 | 5.31e-01 | 85.1% | 97.8% |
| 4996988 | 10.1.2.182 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Glyco_hydro_2_N | 0.63 | 55.0 | 5.58e-01 | 100.0% | 94.5% |
| 3849644 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.63 | 45.0 | 4.94e-01 | 100.0% | 91.1% |
| 3738766 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.63 | 46.0 | 4.94e-01 | 100.0% | 88.3% |
| 2883092 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.63 | 46.0 | 5.02e-01 | 100.0% | 94.1% |
| 4373864 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.62 | 43.0 | 4.57e-01 | 94.6% | 80.0% |
| 3901334 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.61 | 43.0 | 4.69e-01 | 95.2% | 86.4% |
| 3895304 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.61 | 45.0 | 4.32e-01 | 100.0% | 65.6% |
| 3538609 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.61 | 44.0 | 4.69e-01 | 100.0% | 86.2% |
| 3223789 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 38.0 | 4.25e-01 | 100.0% | 81.6% |
| 3786644 | 11.1.1.45 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 | 0.61 | 35.0 | 4.14e-01 | 99.4% | 83.6% |
| 3895211 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.61 | 36.0 | 4.43e-01 | 94.0% | 93.3% |
| 4937309 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 35.0 | 4.27e-01 | 100.0% | 89.5% |
| 3264558 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 41.0 | 4.51e-01 | 100.0% | 86.7% |
| 4276530 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.60 | 38.0 | 4.30e-01 | 100.0% | 86.7% |
| 3554576 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.59 | 46.0 | 3.48e-01 | 100.0% | 33.8% |
| 3892773 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.59 | 36.0 | 4.22e-01 | 100.0% | 88.7% |
| 5038393 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 45.0 | 4.91e-01 | 82.7% | 99.3% |
| 3781122 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.58 | 45.0 | 4.42e-01 | 100.0% | 76.1% |
| 3912828 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.58 | 36.0 | 4.29e-01 | 98.8% | 97.1% |
| 3830724 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.57 | 40.0 | 2.52e-01 | 100.0% | 13.6% |
| 3514837 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 37.0 | 4.37e-01 | 80.4% | 95.7% |
| 3858692 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.57 | 44.0 | 4.20e-01 | 98.2% | 69.7% |
| 5035178 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.57 | 35.0 | 4.22e-01 | 78.0% | 93.6% |
| 3246388 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 38.0 | 4.35e-01 | 79.2% | 95.0% |
| 3513167 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 39.0 | 4.43e-01 | 98.2% | 98.3% |
| 2979144 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.56 | 46.0 | 4.74e-01 | 100.0% | 92.4% |
| 3912745 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.56 | 38.0 | 4.45e-01 | 85.7% | 100.0% |
| 4344066 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.56 | 35.0 | 4.28e-01 | 82.7% | 100.0% |
| 3911617 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.55 | 37.0 | 4.25e-01 | 97.6% | 99.1% |
| 4473722 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.54 | 37.0 | 4.25e-01 | 96.4% | 100.0% |
| 3349333 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.54 | 38.0 | 2.71e-01 | 95.2% | 23.8% |
| 3244708 | 10.4.1.27 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF29839 | 0.54 | 36.0 | 4.12e-01 | 100.0% | 94.2% |
| 4127487 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.54 | 47.0 | 4.58e-01 | 100.0% | 85.9% |
| 406772 | 10.1.1.15 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_12 | 0.54 | 48.0 | 4.24e-01 | 100.0% | 92.6% |
| 3932869 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 39.0 | 4.40e-01 | 75.6% | 100.0% |
| 1682636 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.53 | 35.0 | 4.11e-01 | 95.2% | 100.0% |
| 3408561 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.53 | 36.0 | 4.16e-01 | 70.8% | 95.0% |
| 4947719 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 44.0 | 4.51e-01 | 100.0% | 90.9% |
| 4940593 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 45.0 | 4.52e-01 | 90.5% | 92.4% |
| 3489233 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 48.0 | 4.35e-01 | 100.0% | 97.0% |
| 3480708 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.53 | 36.0 | 4.04e-01 | 72.6% | 90.0% |
| 4424312 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.52 | 43.0 | 4.51e-01 | 100.0% | 95.5% |
| 4667107 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.52 | 41.0 | 4.40e-01 | 100.0% | 97.2% |
| 3892135 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 33.0 | 3.97e-01 | 82.1% | 96.4% |
| 3830721 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.52 | 43.0 | 3.08e-01 | 96.4% | 30.1% |
| 3802666 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.52 | 37.0 | 2.67e-01 | 95.8% | 25.4% |
| 3212513 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 45.0 | 4.47e-01 | 100.0% | 90.9% |
| 3462371 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.52 | 46.0 | 4.59e-01 | 100.0% | 93.7% |
| 150189 | 10.18.1.1 ↗ | beta sandwiches › jelly-roll › VPA0735-like › VPA0735-like › DUF1214 | 0.51 | 46.0 | 3.98e-01 | 99.4% | 62.2% |
| 3894645 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.90e-01 | 96.4% | 94.8% |
| 3797406 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 44.0 | 4.20e-01 | 100.0% | 79.5% |
| 3614885 | 10.32.1.94 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CDC50 | 0.51 | 46.0 | 4.29e-01 | 100.0% | 96.7% |
| 5083095 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 45.0 | 4.57e-01 | 100.0% | 99.4% |
| 3396410 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.50 | 45.0 | 4.47e-01 | 100.0% | 94.3% |
| 4564428 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 39.0 | 3.74e-01 | 81.5% | 92.3% |
D5
medium
residues 46-166_764-778
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18652.7 best | Adhesin_P1_N | 32.9 | 9.00e-08 | 77.2% | 86.8% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 29.0 | 3.39e-01 | 81.6% | 67.4% |
| 2jswA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.55 | 43.0 | 3.86e-01 | 83.1% | 77.8% |
| 3qvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 25.0 | 2.80e-01 | 70.6% | 54.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4052085 | 150.8.1.4 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › Hydro_N_hd | 0.55 | 39.0 | 3.39e-01 | 73.5% | 88.6% |
| 3709425 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.54 | 39.0 | 3.47e-01 | 72.8% | 82.2% |
| 3958444 | 4177.1.1.43 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Hydro_N_hd | 0.54 | 40.0 | 3.42e-01 | 76.5% | 91.4% |
| 3297446 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.51 | 41.0 | 3.57e-01 | 86.0% | 94.4% |
D6
medium
residues 779-802_832-846_887-921
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.87 | 77.0 | 5.97e-01 | 94.6% | 100.0% |
| 8begA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.86 | 77.0 | 5.79e-01 | 94.6% | 100.0% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.85 | 78.0 | 5.92e-01 | 97.3% | 100.0% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.84 | 74.0 | 5.61e-01 | 94.6% | 100.0% |
| 4ofqB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.83 | 76.0 | 5.62e-01 | 100.0% | 97.8% |
| 2woyA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.82 | 75.0 | 5.69e-01 | 97.3% | 100.0% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 65.0 | 5.13e-01 | 98.6% | 97.9% |
| 3r4dA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 59.0 | 5.50e-01 | 100.0% | 96.7% |
| 5d2lE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 55.0 | 4.84e-01 | 98.6% | 99.1% |
| 2atpD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 53.0 | 4.69e-01 | 97.3% | 100.0% |
| 8ediA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 51.0 | 4.82e-01 | 98.6% | 98.9% |
| 2fcbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 50.0 | 4.79e-01 | 98.6% | 96.6% |
| 3lafA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 50.0 | 4.59e-01 | 100.0% | 94.8% |
| 2yd1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 49.0 | 4.53e-01 | 100.0% | 91.8% |
| 2c9aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 4.48e-01 | 100.0% | 97.9% |
| 4m8rA01 | 2.60.40.3920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 48.0 | 4.38e-01 | 100.0% | 97.1% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 49.0 | 4.40e-01 | 98.6% | 96.1% |
| 2d73A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 43.0 | 3.02e-01 | 90.5% | 96.8% |
| 2bmjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 3.13e-01 | 83.8% | 97.1% |
| 3bfoA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 47.0 | 4.50e-01 | 100.0% | 97.6% |
| 4l3aA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 46.0 | 4.50e-01 | 100.0% | 95.0% |
| 1edqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.00e-01 | 98.6% | 97.2% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.16e-01 | 94.6% | 100.0% |
| 1u8zA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 2.99e-01 | 79.7% | 98.8% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 2.86e-01 | 75.7% | 100.0% |
| 2gj8D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 37.0 | 3.01e-01 | 85.1% | 96.5% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2983651 | 11.1.5.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 | 0.87 | 81.0 | 6.20e-01 | 100.0% | 98.1% |
| 4538527 | 11.1.5.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 | 0.84 | 77.0 | 5.76e-01 | 98.6% | 96.5% |
| 4097420 | 11.1.5.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C | 0.84 | 77.0 | 5.82e-01 | 98.6% | 99.4% |
| 4270390 | 11.1.5.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C | 0.83 | 78.0 | 5.77e-01 | 100.0% | 94.7% |
| 5044441 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 59.0 | 5.39e-01 | 98.6% | 97.0% |
| 3540638 | 11.1.1.1006 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26197 | 0.67 | 59.0 | 5.16e-01 | 98.6% | 97.3% |
| 3878195 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 51.0 | 4.02e-01 | 93.2% | 41.3% |
| 5053491 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 58.0 | 4.72e-01 | 100.0% | 70.8% |
| 3884152 | 11.1.1.1000 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26198 | 0.63 | 55.0 | 4.86e-01 | 100.0% | 97.3% |
| 3752496 | 11.1.1.1000 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26198 | 0.62 | 54.0 | 4.73e-01 | 100.0% | 93.9% |
| 5049505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 57.0 | 5.18e-01 | 100.0% | 96.8% |
| 5044985 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 55.0 | 4.74e-01 | 100.0% | 87.8% |
| 4969046 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 55.0 | 4.89e-01 | 100.0% | 88.6% |
| 5068353 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.61 | 55.0 | 5.30e-01 | 100.0% | 98.8% |
| 5051193 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 56.0 | 4.58e-01 | 100.0% | 64.6% |
| 5061695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 53.0 | 5.03e-01 | 97.3% | 98.9% |
| 3984834 | 11.1.1.245 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 | 0.61 | 53.0 | 4.90e-01 | 97.3% | 100.0% |
| 3540047 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 52.0 | 5.01e-01 | 97.3% | 100.0% |
| 5069308 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.59 | 53.0 | 4.97e-01 | 100.0% | 93.3% |
| 3922728 | 11.1.1.317 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR-1-like_Ig-like | 0.58 | 51.0 | 4.76e-01 | 100.0% | 96.8% |
| 4968293 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 4.66e-01 | 97.3% | 100.0% |
| 5066874 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 50.0 | 4.65e-01 | 100.0% | 97.9% |
| 5032797 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 49.0 | 4.42e-01 | 100.0% | 91.4% |
| 5032979 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 49.0 | 4.34e-01 | 100.0% | 87.3% |
| 5069304 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 4.17e-01 | 100.0% | 97.4% |
| 3896525 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.66e-01 | 95.9% | 95.7% |
| 3259326 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 4.28e-01 | 98.6% | 100.0% |
| 4942835 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 46.0 | 4.20e-01 | 98.6% | 92.0% |
| 9622 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 40.0 | 3.13e-01 | 83.8% | 97.7% |
| 4149293 | 11.1.1.805 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 | 0.52 | 45.0 | 3.70e-01 | 100.0% | 75.2% |
| 3909872 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 38.0 | 2.91e-01 | 81.1% | 89.7% |
| 3673852 | 2004.1.1.548 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras, Roc | 0.51 | 39.0 | 2.85e-01 | 85.1% | 82.1% |
| 4002829 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 45.0 | 4.36e-01 | 100.0% | 90.6% |
| 4322467 | 11.1.1.150 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Velvet | 0.51 | 44.0 | 3.82e-01 | 100.0% | 80.8% |
| 4616828 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 45.0 | 4.33e-01 | 98.6% | 95.3% |
| 3259303 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.51 | 37.0 | 2.93e-01 | 82.4% | 91.9% |
D7
medium
residues 803-831_847-886
Domain cluster:
representative
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tshB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.96 | 91.0 | 6.52e-01 | 100.0% | 47.4% |
| 2woyA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.82 | 74.0 | 5.60e-01 | 100.0% | 62.7% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.80 | 72.0 | 5.49e-01 | 100.0% | 63.2% |
| 3qdhA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.75 | 67.0 | 5.12e-01 | 100.0% | 53.8% |
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 64.0 | 4.96e-01 | 100.0% | 62.4% |
| 1tuaA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.67 | 48.0 | 4.45e-01 | 73.9% | 77.4% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.66 | 46.0 | 4.33e-01 | 72.5% | 76.8% |
| 4uypA01 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 58.0 | 4.62e-01 | 100.0% | 57.1% |
| 4mboA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 58.0 | 4.47e-01 | 100.0% | 51.7% |
| 4je0B01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 58.0 | 4.45e-01 | 100.0% | 53.9% |
| 3au0A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 58.0 | 4.47e-01 | 100.0% | 57.0% |
| 3irpX01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 57.0 | 4.43e-01 | 100.0% | 53.3% |
| 1r17B01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 57.0 | 4.36e-01 | 100.0% | 48.8% |
| 1anuA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 56.0 | 4.48e-01 | 100.0% | 60.9% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 43.0 | 3.47e-01 | 71.0% | 82.3% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 57.0 | 4.06e-01 | 100.0% | 49.0% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 4.16e-01 | 72.5% | 80.2% |
| 8gf5C01 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 43.0 | 3.41e-01 | 73.9% | 68.3% |
| 6lebA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 54.0 | 4.32e-01 | 100.0% | 67.6% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 49.0 | 4.02e-01 | 97.1% | 54.3% |
| 4e9jA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 41.0 | 4.16e-01 | 73.9% | 89.9% |
| 2cpqA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 41.0 | 4.26e-01 | 73.9% | 96.9% |
| 7kbrC01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 48.0 | 3.98e-01 | 97.1% | 77.6% |
| 1mkfA02 | 2.60.40.1340 | Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like | 0.57 | 47.0 | 3.62e-01 | 95.7% | 91.9% |
| 7z47G01 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 41.0 | 4.17e-01 | 91.3% | 77.1% |
| 1weyA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 41.0 | 3.56e-01 | 76.8% | 63.5% |
| 5erdA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.56 | 49.0 | 4.24e-01 | 98.6% | 74.5% |
| 3tp2B02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 39.0 | 3.52e-01 | 73.9% | 75.8% |
| 1l3wA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.56 | 48.0 | 4.16e-01 | 100.0% | 72.8% |
| 5whzH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 3.88e-01 | 95.7% | 74.8% |
| 1l3wA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 46.0 | 4.08e-01 | 100.0% | 74.8% |
| 6mjjC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 3.91e-01 | 95.7% | 75.4% |
| 1hxmB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 3.87e-01 | 98.6% | 76.8% |
| 2ctfA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 43.0 | 3.76e-01 | 87.0% | 67.6% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 38.0 | 3.36e-01 | 75.4% | 60.6% |
| 6vg1A04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 45.0 | 4.00e-01 | 98.6% | 78.8% |
| 3n89A01 | 3.30.310.270 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 44.0 | 3.24e-01 | 95.7% | 73.4% |
| 4lq0A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 43.0 | 3.47e-01 | 94.2% | 66.0% |
| 7l15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 3.88e-01 | 98.6% | 78.8% |
| 8egxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 44.0 | 3.99e-01 | 98.6% | 81.2% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.52 | 44.0 | 3.64e-01 | 100.0% | 51.5% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.76e-01 | 76.8% | 80.6% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 36.0 | 3.47e-01 | 72.5% | 75.3% |
| 3pieA02 | 3.30.1370.250 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 43.0 | 3.92e-01 | 100.0% | 94.0% |
| 5dzxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 44.0 | 3.92e-01 | 100.0% | 75.0% |
| 3ifrB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 42.0 | 2.94e-01 | 92.8% | 54.5% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 38.0 | 3.22e-01 | 82.6% | 89.8% |
| 2k8qA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.32e-01 | 88.4% | 85.1% |
| 1whxA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 37.0 | 3.15e-01 | 76.8% | 59.5% |
| 4ak1A03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 43.0 | 4.25e-01 | 100.0% | 91.8% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4250559 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.97 | 93.0 | 6.47e-01 | 100.0% | 44.3% |
| 1283663 | 11.1.5.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C | 0.80 | 72.0 | 5.48e-01 | 100.0% | 62.8% |
| 3590065 | 11.1.5.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 | 0.77 | 69.0 | 5.34e-01 | 100.0% | 58.0% |
| 2983651 | 11.1.5.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 | 0.72 | 64.0 | 4.90e-01 | 100.0% | 59.6% |
| 3498171 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 57.0 | 4.12e-01 | 100.0% | 51.5% |
| 4163835 | 11.1.5.56 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Zona_CL1 | 0.65 | 57.0 | 4.49e-01 | 100.0% | 59.3% |
| 4130905 | 11.1.5.48 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Big_8 | 0.64 | 58.0 | 4.38e-01 | 100.0% | 49.4% |
| 3986771 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.64 | 52.0 | 4.27e-01 | 89.9% | 83.8% |
| 3727976 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.63 | 43.0 | 4.43e-01 | 71.0% | 100.0% |
| 3174286 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.61 | 46.0 | 2.87e-01 | 84.1% | 31.2% |
| 4604674 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 42.0 | 3.36e-01 | 72.5% | 60.0% |
| 3413711 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.61 | 42.0 | 4.33e-01 | 71.0% | 90.8% |
| 3882607 | 11.1.1.860 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CLSTN_C | 0.60 | 53.0 | 3.09e-01 | 100.0% | 56.7% |
| 3508541 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.60 | 49.0 | 4.05e-01 | 92.8% | 85.4% |
| 4027855 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.59 | 45.0 | 3.78e-01 | 79.7% | 78.2% |
| 3908415 | 11.1.1.860 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CLSTN_C | 0.58 | 52.0 | 4.03e-01 | 100.0% | 56.0% |
| 3565930 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.58 | 41.0 | 3.93e-01 | 73.9% | 77.5% |
| 3875637 | 10.1.1.68 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CLSTN_C | 0.58 | 51.0 | 4.05e-01 | 100.0% | 55.2% |
| 3559172 | 6169.1.1.31 ↗ | extended segments › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › CLSTN_C | 0.58 | 51.0 | 4.04e-01 | 100.0% | 55.2% |
| 3503747 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 51.0 | 4.08e-01 | 100.0% | 52.9% |
| 3930384 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 50.0 | 4.42e-01 | 100.0% | 82.9% |
| 3972739 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.58 | 41.0 | 4.10e-01 | 73.9% | 88.6% |
| 3935226 | 11.1.1.605 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_9th | 0.57 | 45.0 | 4.22e-01 | 84.1% | 98.8% |
| 3882844 | 11.1.5.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CLSTN_C | 0.57 | 50.0 | 4.03e-01 | 100.0% | 52.9% |
| 5034466 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.57 | 48.0 | 4.28e-01 | 100.0% | 66.7% |
| 3232671 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 4.36e-01 | 91.3% | 74.1% |
| 4464001 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 47.0 | 3.96e-01 | 91.3% | 79.1% |
| 4951019 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.56 | 42.0 | 3.80e-01 | 81.2% | 78.9% |
| 3895815 | 327.16.1.13 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › KH_PARP14_2 | 0.56 | 38.0 | 3.85e-01 | 71.0% | 77.1% |
| 3934677 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 3.81e-01 | 98.6% | 53.3% |
| 3182317 | 327.11.2.38 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_SLS1_1 | 0.56 | 39.0 | 4.03e-01 | 72.5% | 87.7% |
| 3703829 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 3.90e-01 | 98.6% | 66.7% |
| 3394001 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.55 | 47.0 | 3.97e-01 | 100.0% | 76.6% |
| 3866713 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 3.88e-01 | 100.0% | 55.6% |
| 3869056 | 11.1.1.605 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_9th | 0.55 | 45.0 | 4.21e-01 | 100.0% | 72.9% |
| 3261036 | 11.1.1.605 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_9th | 0.55 | 43.0 | 3.79e-01 | 98.6% | 57.1% |
| 3918066 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 49.0 | 3.79e-01 | 100.0% | 59.3% |
| 3620263 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 4.22e-01 | 100.0% | 80.0% |
| 3881641 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.05e-01 | 100.0% | 89.1% |
| 3938310 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 4.14e-01 | 98.6% | 85.7% |
| 3896019 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.54 | 47.0 | 3.91e-01 | 100.0% | 66.4% |
| 5070479 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.54 | 38.0 | 3.14e-01 | 73.9% | 85.0% |
| 3882368 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.53 | 45.0 | 4.00e-01 | 98.6% | 80.0% |
| 4971032 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.53 | 38.0 | 3.52e-01 | 73.9% | 70.6% |
| 5032948 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.53 | 37.0 | 3.11e-01 | 73.9% | 84.2% |
| 3922018 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.93e-01 | 100.0% | 80.9% |
| 3969516 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.53 | 44.0 | 3.28e-01 | 97.1% | 39.0% |
| 5068351 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.53 | 47.0 | 4.26e-01 | 100.0% | 88.4% |
| 5070104 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.53 | 47.0 | 4.24e-01 | 100.0% | 89.5% |
| 3930383 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.07e-01 | 100.0% | 75.0% |
| 5068360 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 47.0 | 4.22e-01 | 100.0% | 91.6% |
| 5067541 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.52 | 46.0 | 4.17e-01 | 100.0% | 86.3% |
| 3887510 | 304.9.1.150 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_PARP14_1, RRM_PARP14_2 | 0.52 | 39.0 | 2.81e-01 | 78.3% | 35.5% |
| 3741774 | 5046.1.1.0 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b | 0.52 | 43.0 | 3.98e-01 | 98.6% | 88.4% |
| 5070093 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.52 | 46.0 | 4.16e-01 | 100.0% | 87.4% |
| 4218542 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.51 | 37.0 | 3.94e-01 | 76.8% | 90.0% |
| 5067774 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.51 | 46.0 | 4.16e-01 | 100.0% | 92.6% |
| 4629020 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.51 | 43.0 | 3.31e-01 | 100.0% | 60.9% |
| 3266618 | 109.4.1.1948 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle | 0.51 | 36.0 | 2.29e-01 | 73.9% | 34.3% |
| 5068359 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.51 | 45.0 | 4.06e-01 | 100.0% | 88.4% |
| 5058706 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 44.0 | 4.09e-01 | 100.0% | 90.0% |