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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00383
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00383
Identity
- Kingdom:
- phage
Quality
88.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-130
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.74 | 68.0 | 5.51e-01 | 100.0% | 79.6% |
| 3f9sB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 49.0 | 4.43e-01 | 72.4% | 58.2% |
| 1jkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 48.0 | 4.33e-01 | 71.4% | 80.6% |
| 3ke7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 43.0 | 3.94e-01 | 71.4% | 48.9% |
| 3gzbA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 48.0 | 4.18e-01 | 72.4% | 51.9% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 45.0 | 4.20e-01 | 84.8% | 55.5% |
| 4h3uA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 47.0 | 4.41e-01 | 81.9% | 59.2% |
| 7f13A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 47.0 | 4.25e-01 | 88.6% | 54.2% |
| 3dm8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 45.0 | 4.15e-01 | 73.3% | 54.8% |
| 2gexA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 53.0 | 4.77e-01 | 87.6% | 64.4% |
| 3kkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 45.0 | 4.05e-01 | 72.4% | 56.9% |
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 39.0 | 3.70e-01 | 71.4% | 50.0% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 49.0 | 4.36e-01 | 85.7% | 57.4% |
| 1sjwA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 48.0 | 4.30e-01 | 79.0% | 57.7% |
| 3ec9A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 43.0 | 4.00e-01 | 78.1% | 55.0% |
| 3ehcB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 44.0 | 4.19e-01 | 73.3% | 59.4% |
| 4lgqA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 45.0 | 4.20e-01 | 74.3% | 58.6% |
| 2chcC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 50.0 | 4.32e-01 | 83.8% | 83.6% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 43.0 | 4.06e-01 | 88.6% | 58.9% |
| 3fidA00 | 2.40.128.140 | Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein | 0.63 | 55.0 | 3.98e-01 | 96.2% | 77.4% |
| 3k0zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 42.0 | 3.78e-01 | 80.0% | 49.0% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 40.0 | 3.81e-01 | 71.4% | 56.1% |
| 6hswA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 52.0 | 3.51e-01 | 95.2% | 37.5% |
| 1nu3A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 45.0 | 4.10e-01 | 81.0% | 77.2% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 39.0 | 3.79e-01 | 77.1% | 57.9% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 31.0 | 3.70e-01 | 81.9% | 79.4% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 45.0 | 4.20e-01 | 85.7% | 69.7% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 34.0 | 3.97e-01 | 81.9% | 88.7% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 4.00e-01 | 75.2% | 84.7% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 33.0 | 3.43e-01 | 82.9% | 61.0% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 4.08e-01 | 85.7% | 67.9% |
| 3c1aA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 37.0 | 3.32e-01 | 87.6% | 49.0% |
| 2bngC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 40.0 | 3.65e-01 | 77.1% | 76.4% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.52 | 47.0 | 3.93e-01 | 100.0% | 62.6% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 32.0 | 3.84e-01 | 81.9% | 95.7% |
| 1yguA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 35.0 | 2.66e-01 | 81.0% | 26.4% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.20e-01 | 87.6% | 60.6% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.51 | 36.0 | 3.18e-01 | 100.0% | 47.6% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.51 | 34.0 | 3.38e-01 | 77.1% | 65.4% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 33.0 | 3.47e-01 | 88.6% | 74.7% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.50 | 40.0 | 3.59e-01 | 86.7% | 63.5% |
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.50 | 42.0 | 2.85e-01 | 91.4% | 43.7% |
| 2pslA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 42.0 | 3.44e-01 | 96.2% | 90.3% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3744079 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.73 | 52.0 | 4.86e-01 | 91.4% | 61.6% |
| 4878195 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.69 | 49.0 | 4.89e-01 | 79.0% | 70.0% |
| 3283292 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.69 | 50.0 | 4.61e-01 | 93.3% | 60.0% |
| 3735183 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.69 | 44.0 | 4.13e-01 | 81.9% | 54.4% |
| 5003871 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.68 | 46.0 | 4.16e-01 | 85.7% | 52.1% |
| 3620045 | 883.1.1.6 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N | 0.67 | 60.0 | 5.28e-01 | 99.0% | 72.9% |
| 3234838 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.66 | 40.0 | 3.82e-01 | 82.9% | 51.7% |
| 3947973 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.65 | 44.0 | 4.21e-01 | 78.1% | 58.4% |
| 4962810 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.65 | 48.0 | 4.38e-01 | 79.0% | 59.3% |
| 3957839 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.65 | 44.0 | 4.07e-01 | 85.7% | 55.4% |
| 3277756 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.64 | 43.0 | 3.95e-01 | 87.6% | 53.7% |
| 6367 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.64 | 48.0 | 4.30e-01 | 79.0% | 57.7% |
| 3829053 | 243.1.1.49 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 | 0.64 | 45.0 | 4.05e-01 | 83.8% | 54.3% |
| 1087544 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.64 | 45.0 | 4.19e-01 | 74.3% | 58.2% |
| 3284100 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.63 | 48.0 | 4.12e-01 | 81.0% | 60.0% |
| 4959875 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.63 | 48.0 | 4.35e-01 | 80.0% | 60.7% |
| 4978484 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.63 | 43.0 | 4.00e-01 | 83.8% | 56.2% |
| 1562270 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.63 | 43.0 | 4.04e-01 | 88.6% | 58.9% |
| 4018488 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 46.0 | 3.66e-01 | 77.1% | 60.0% |
| 3725114 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 44.0 | 3.95e-01 | 81.9% | 53.8% |
| 5048351 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.62 | 47.0 | 4.20e-01 | 82.9% | 57.9% |
| 5071439 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.61 | 46.0 | 4.18e-01 | 79.0% | 60.4% |
| 2163935 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.60 | 45.0 | 4.13e-01 | 79.0% | 60.7% |
| 3970325 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.60 | 45.0 | 4.14e-01 | 80.0% | 60.0% |
| 2701774 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.59 | 48.0 | 4.19e-01 | 89.5% | 87.0% |
| 3736685 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 49.0 | 4.23e-01 | 95.2% | 77.6% |
| 3960625 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 44.0 | 3.93e-01 | 81.9% | 86.7% |
| 3281821 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.57 | 46.0 | 4.26e-01 | 85.7% | 70.8% |
| 4251418 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.56 | 48.0 | 3.81e-01 | 94.3% | 47.0% |
| 4974124 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.54 | 44.0 | 3.95e-01 | 85.7% | 66.4% |
| 4940126 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.53 | 41.0 | 4.00e-01 | 84.8% | 79.2% |
| 4052992 | 2484.1.1.222 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UPF0236 | 0.52 | 38.0 | 3.19e-01 | 78.1% | 92.6% |
| 4947780 | 212.1.1.22 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans | 0.52 | 43.0 | 3.45e-01 | 93.3% | 70.9% |
| 5022778 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 4.34e-01 | 98.1% | 100.0% |