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pre3_saliva_scaffold_7_prodigal-single.1__X__X__00421
Bact-Virpre3_saliva_scaffold_7_prodigal-single.1__X__X__00421
Identity
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bmoA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.79 | 61.0 | 3.97e-01 | 83.8% | 20.0% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 51.0 | 5.56e-01 | 79.4% | 96.5% |
| 1w36B04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.61 | 41.0 | 3.29e-01 | 70.6% | 39.0% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.61 | 46.0 | 4.12e-01 | 91.2% | 58.2% |
| 3qbrX00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.60 | 41.0 | 3.22e-01 | 77.9% | 31.1% |
| 1ywfA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 41.0 | 2.95e-01 | 82.4% | 49.4% |
| 4o8mD00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.52 | 43.0 | 2.90e-01 | 98.5% | 72.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3681259 | 5058.1.1.57 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › V-SNARE | 0.74 | 55.0 | 5.12e-01 | 80.9% | 63.5% |
| 4344927 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.74 | 50.0 | 4.98e-01 | 70.6% | 68.6% |
| 4971143 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.72 | 53.0 | 4.87e-01 | 76.5% | 63.5% |
| 5066347 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 55.0 | 4.21e-01 | 85.3% | 38.0% |
| 4934385 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.70 | 55.0 | 3.97e-01 | 85.3% | 37.4% |
D2
medium
residues 71-137
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ffhA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.84 | 66.0 | 5.19e-01 | 83.6% | 61.4% |
| 1lc5A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.74 | 56.0 | 4.63e-01 | 83.6% | 66.4% |
| 3fkdA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.72 | 56.0 | 4.81e-01 | 86.6% | 77.7% |
| 3eucA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.71 | 51.0 | 4.06e-01 | 76.1% | 56.2% |
| 4w1vA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.71 | 59.0 | 4.49e-01 | 91.0% | 56.3% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.68 | 50.0 | 5.09e-01 | 85.1% | 81.5% |
| 4cswA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.67 | 46.0 | 3.44e-01 | 73.1% | 41.5% |
| 2hjjA00 | 3.30.160.130 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains | 0.67 | 54.0 | 5.48e-01 | 91.0% | 97.0% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.66 | 49.0 | 4.43e-01 | 82.1% | 89.9% |
| 3qpbF00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.66 | 54.0 | 3.66e-01 | 89.6% | 90.0% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.65 | 52.0 | 4.67e-01 | 89.6% | 80.2% |
| 3a8pB01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 47.0 | 3.97e-01 | 77.6% | 49.1% |
| 3mixA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.64 | 51.0 | 4.30e-01 | 91.0% | 70.0% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 44.0 | 4.04e-01 | 76.1% | 54.4% |
| 1egxA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 41.0 | 3.47e-01 | 71.6% | 40.0% |
| 1e8oD00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.61 | 43.0 | 4.18e-01 | 74.6% | 65.8% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 41.0 | 4.21e-01 | 76.1% | 72.7% |
| 2g7jA00 | 3.90.1150.40 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 | 0.61 | 49.0 | 4.19e-01 | 91.0% | 97.3% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.60 | 50.0 | 4.80e-01 | 94.0% | 94.8% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 48.0 | 4.55e-01 | 89.6% | 87.8% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 40.0 | 3.59e-01 | 70.1% | 47.9% |
| 3rriA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 52.0 | 4.21e-01 | 100.0% | 87.0% |
| 2e8eA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 44.0 | 3.59e-01 | 80.6% | 41.7% |
| 4nswA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 40.0 | 3.49e-01 | 71.6% | 46.8% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 42.0 | 3.91e-01 | 77.6% | 84.4% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.59 | 50.0 | 3.09e-01 | 97.0% | 77.1% |
| 4mchA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.59 | 48.0 | 3.29e-01 | 89.6% | 88.9% |
| 1nkiA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 50.0 | 4.10e-01 | 100.0% | 79.1% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.58 | 45.0 | 3.46e-01 | 88.1% | 76.7% |
| 3kd9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 45.0 | 3.41e-01 | 85.1% | 91.0% |
| 3uh9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 49.0 | 4.02e-01 | 100.0% | 81.2% |
| 1zc3B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 39.0 | 3.43e-01 | 73.1% | 48.6% |
| 7d27A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.57 | 43.0 | 3.05e-01 | 83.6% | 35.7% |
| 4gzuA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 38.0 | 3.04e-01 | 70.1% | 33.3% |
| 1ecsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 48.0 | 4.09e-01 | 100.0% | 91.7% |
| 2yt4A03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 41.0 | 3.68e-01 | 82.1% | 60.6% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.56 | 42.0 | 3.81e-01 | 83.6% | 96.8% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 39.0 | 3.43e-01 | 76.1% | 47.6% |
| 5gu7C01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 41.0 | 3.56e-01 | 86.6% | 62.6% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 42.0 | 2.67e-01 | 80.6% | 29.9% |
| 4bubA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.55 | 41.0 | 2.93e-01 | 83.6% | 31.3% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 41.0 | 2.74e-01 | 83.6% | 78.1% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.99e-01 | 73.1% | 86.7% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 38.0 | 3.38e-01 | 73.1% | 51.0% |
| 4b7oA01 | 2.170.130.10 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain | 0.54 | 43.0 | 3.68e-01 | 88.1% | 64.9% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.54 | 37.0 | 3.90e-01 | 73.1% | 95.0% |
| 3ct8A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 44.0 | 3.64e-01 | 95.5% | 85.7% |
| 4esnA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.53 | 40.0 | 3.88e-01 | 85.1% | 88.5% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 43.0 | 2.95e-01 | 98.5% | 48.8% |
| 7pluA01 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 34.0 | 2.99e-01 | 70.1% | 40.7% |
| 6o15A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 44.0 | 3.08e-01 | 97.0% | 70.4% |
| 1f1sA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.52 | 31.0 | 2.99e-01 | 71.6% | 48.8% |
| 3uboB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 2.89e-01 | 100.0% | 85.6% |
| 2jroA01 | 3.30.1910.10 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › so0334 like domain | 0.51 | 34.0 | 3.53e-01 | 71.6% | 75.4% |
| 3h49B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 38.0 | 2.57e-01 | 83.6% | 42.1% |
| 1r89A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.50 | 34.0 | 2.86e-01 | 71.6% | 45.3% |
| 6fmeA02 | 3.90.400.10 | Alpha Beta › Alpha-Beta Complex › Oligo-1,6-glucosidase; domain 2 › Oligo-1,6-glucosidase; Domain 2 | 0.50 | 35.0 | 3.30e-01 | 73.1% | 96.3% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 38.0 | 3.34e-01 | 88.1% | 97.4% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3900771 | 330.9.1.0 ↗ | a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p | 0.73 | 50.0 | 5.25e-01 | 79.1% | 80.0% |
| 3621726 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.72 | 50.0 | 3.97e-01 | 100.0% | 38.4% |
| 4961538 | 2002.1.1.256 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MSH_C | 0.72 | 45.0 | 2.73e-01 | 74.6% | 10.0% |
| 3267508 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.69 | 41.0 | 3.57e-01 | 91.0% | 40.0% |
| 4213592 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.69 | 53.0 | 4.80e-01 | 85.1% | 83.2% |
| 3953675 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.69 | 53.0 | 5.38e-01 | 86.6% | 98.5% |
| 3706686 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.68 | 45.0 | 4.58e-01 | 77.6% | 70.8% |
| 3757091 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 50.0 | 4.06e-01 | 80.6% | 43.8% |
| 4056475 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.67 | 59.0 | 5.14e-01 | 100.0% | 87.4% |
| 4983181 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 51.0 | 4.21e-01 | 82.1% | 87.5% |
| 5028212 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.66 | 48.0 | 3.72e-01 | 77.6% | 98.0% |
| 3224950 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 49.0 | 4.22e-01 | 80.6% | 51.4% |
| 4120754 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.64 | 53.0 | 3.67e-01 | 91.0% | 83.1% |
| 4929483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.64 | 52.0 | 4.26e-01 | 100.0% | 49.2% |
| 1318709 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.63 | 44.0 | 2.97e-01 | 71.6% | 34.9% |
| 4001872 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.63 | 46.0 | 3.35e-01 | 80.6% | 27.6% |
| 3496920 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 46.0 | 3.66e-01 | 79.1% | 39.3% |
| 3518065 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.63 | 47.0 | 3.74e-01 | 80.6% | 39.3% |
| 3540167 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 46.0 | 3.72e-01 | 79.1% | 41.5% |
| 3516025 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 46.0 | 3.98e-01 | 77.6% | 54.3% |
| 3782688 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.63 | 43.0 | 3.19e-01 | 71.6% | 46.3% |
| 4974686 | 2487.1.1.8 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like | 0.63 | 53.0 | 3.80e-01 | 94.0% | 95.5% |
| 4609138 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 49.0 | 3.83e-01 | 86.6% | 72.0% |
| 3270411 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.62 | 43.0 | 3.67e-01 | 73.1% | 45.2% |
| 4565003 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.62 | 43.0 | 3.51e-01 | 73.1% | 38.5% |
| 3580620 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.62 | 42.0 | 3.15e-01 | 71.6% | 63.4% |
| 4928595 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.62 | 42.0 | 3.61e-01 | 70.1% | 51.4% |
| 3887127 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.62 | 44.0 | 3.62e-01 | 79.1% | 41.7% |
| 3899275 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.62 | 42.0 | 3.37e-01 | 80.6% | 35.6% |
| 4971267 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.61 | 46.0 | 3.71e-01 | 80.6% | 41.5% |
| 3247329 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 44.0 | 3.80e-01 | 79.1% | 47.3% |
| 3921879 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 44.0 | 3.36e-01 | 79.1% | 31.9% |
| 3797608 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 44.0 | 3.79e-01 | 79.1% | 47.3% |
| 3479095 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 45.0 | 3.76e-01 | 79.1% | 45.2% |
| 4202176 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.61 | 45.0 | 3.31e-01 | 80.6% | 28.4% |
| 3493320 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.61 | 45.0 | 3.58e-01 | 80.6% | 39.3% |
| 3940847 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.60 | 44.0 | 3.78e-01 | 80.6% | 47.3% |
| 3912099 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 45.0 | 3.91e-01 | 80.6% | 50.5% |
| 3503857 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 44.0 | 3.83e-01 | 79.1% | 50.0% |
| 3414375 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 44.0 | 3.61e-01 | 80.6% | 41.4% |
| 3791995 | 220.1.1.37 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 | 0.60 | 44.0 | 3.43e-01 | 79.1% | 35.5% |
| 5035483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 46.0 | 3.41e-01 | 82.1% | 50.0% |
| 3576021 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 43.0 | 3.53e-01 | 79.1% | 40.0% |
| 3474420 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.59 | 44.0 | 3.47e-01 | 80.6% | 36.7% |
| 3476418 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 44.0 | 3.57e-01 | 80.6% | 40.7% |
| 5029960 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.59 | 45.0 | 2.92e-01 | 86.6% | 77.2% |
| 3508939 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.59 | 43.0 | 3.49e-01 | 80.6% | 40.0% |
| 3620293 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 53.0 | 4.21e-01 | 100.0% | 63.1% |
| 3841716 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.59 | 44.0 | 3.41e-01 | 80.6% | 36.1% |
| 5081361 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 41.0 | 3.55e-01 | 73.1% | 51.0% |
| 4982613 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 43.0 | 4.39e-01 | 80.6% | 93.8% |
| 5067782 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 43.0 | 4.28e-01 | 80.6% | 85.7% |
| 3548074 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 43.0 | 3.60e-01 | 80.6% | 54.2% |
| 3515993 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.57 | 38.0 | 3.22e-01 | 73.1% | 39.2% |
| 5073587 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.57 | 42.0 | 3.80e-01 | 80.6% | 63.2% |
| 3595376 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 41.0 | 3.18e-01 | 79.1% | 33.8% |
| 3289164 | 295.1.1.25 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF397 | 0.56 | 42.0 | 3.62e-01 | 82.1% | 81.8% |
| 3558865 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.56 | 41.0 | 3.54e-01 | 83.6% | 62.5% |
| 5028765 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.56 | 46.0 | 3.57e-01 | 92.5% | 78.7% |
| 3595598 | 2485.1.1.43 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 | 0.55 | 43.0 | 3.69e-01 | 88.1% | 67.0% |
| 3398379 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 37.0 | 3.13e-01 | 70.1% | 39.2% |
| 5044090 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 42.0 | 3.15e-01 | 82.1% | 60.6% |
| 5079456 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.54 | 43.0 | 3.10e-01 | 83.6% | 61.7% |
| 4133979 | 2486.1.1.11 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_2 | 0.54 | 46.0 | 3.05e-01 | 95.5% | 44.4% |
| 3647550 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.54 | 41.0 | 3.84e-01 | 85.1% | 72.9% |
| 3231485 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.54 | 45.0 | 3.50e-01 | 95.5% | 52.5% |
| 3964082 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 41.0 | 3.22e-01 | 80.6% | 56.4% |
| 3727615 | 3270.1.1.1 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 | 0.54 | 43.0 | 3.99e-01 | 95.5% | 96.8% |
| 3223155 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.53 | 37.0 | 2.53e-01 | 73.1% | 19.3% |
| 5001238 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 43.0 | 3.73e-01 | 91.0% | 56.4% |
| 3413910 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.52 | 47.0 | 3.69e-01 | 98.5% | 78.5% |
| 4965851 | 4100.1.1.9 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 | 0.51 | 35.0 | 3.80e-01 | 71.6% | 85.5% |
| 3397680 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 47.0 | 2.66e-01 | 100.0% | 38.0% |
| 3414272 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.51 | 37.0 | 3.33e-01 | 77.6% | 75.8% |
D3
medium
residues 138-247