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pre4_saliva_scaffold_3_prodigal-single.1__X__X__00031
Bact-Virpre4_saliva_scaffold_3_prodigal-single.1__X__X__00031
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-105
Domain cluster:
rep: NC_019457.1__YP_007003049.1__F353_gp09__00009__D5-76
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 56.0 | 5.76e-01 | 90.9% | 96.8% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 31.0 | 3.55e-01 | 86.9% | 61.1% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 35.0 | 3.67e-01 | 100.0% | 64.4% |
| 2l1sA00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.57 | 41.0 | 4.38e-01 | 83.8% | 88.0% |
| 3ed4A02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 34.0 | 3.73e-01 | 76.8% | 74.7% |
| 1tuoA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.53 | 26.0 | 3.05e-01 | 81.8% | 66.2% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 42.0 | 2.94e-01 | 86.9% | 98.3% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 38.0 | 2.59e-01 | 74.7% | 40.0% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 39.0 | 2.80e-01 | 77.8% | 66.3% |
| 3ihgA03 | 3.40.30.120 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.51 | 40.0 | 3.68e-01 | 87.9% | 87.3% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 39.0 | 2.73e-01 | 79.8% | 36.1% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.51 | 37.0 | 3.99e-01 | 78.8% | 87.4% |
| 1genA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.51 | 42.0 | 3.36e-01 | 89.9% | 54.0% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 35.0 | 3.23e-01 | 72.7% | 80.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3288266 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.83 | 51.0 | 6.24e-01 | 83.8% | 96.8% |
| 6280 | 234.3.1.1 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain › Colicin_D | 0.67 | 57.0 | 5.59e-01 | 91.9% | 88.8% |
| 3948032 | 3155.1.1.1 ↗ | a+b two layers › Uncharacterized protein yohN › Uncharacterized protein yohN › Uncharacterized protein yohN › RcnB | 0.61 | 43.0 | 4.73e-01 | 80.8% | 92.3% |
| 119254 | 3155.1.1.1 ↗ | a+b two layers › Uncharacterized protein yohN › Uncharacterized protein yohN › Uncharacterized protein yohN › RcnB | 0.57 | 41.0 | 4.38e-01 | 83.8% | 88.0% |
| 3702018 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 39.0 | 2.64e-01 | 72.7% | 62.7% |
| 5055697 | 5.1.4.668 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CGLA | 0.54 | 39.0 | 2.75e-01 | 75.8% | 49.5% |
| 3704178 | 5.1.4.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N | 0.54 | 39.0 | 2.64e-01 | 75.8% | 41.8% |
| 3210247 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 37.0 | 2.51e-01 | 72.7% | 35.1% |
| 3640780 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 37.0 | 2.45e-01 | 72.7% | 32.1% |
| 3537300 | 5.1.4.313 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 | 0.53 | 38.0 | 2.64e-01 | 74.7% | 56.3% |
| 3363154 | 6043.1.1.4 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 | 0.52 | 40.0 | 4.28e-01 | 79.8% | 100.0% |
| 3621626 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.52 | 39.0 | 2.64e-01 | 77.8% | 49.0% |
| 3369784 | 809.1.1.5 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › PHAF1 | 0.52 | 40.0 | 4.28e-01 | 79.8% | 100.0% |
| 3899321 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 41.0 | 2.80e-01 | 82.8% | 50.0% |
| 3804520 | 5.1.4.56 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 | 0.52 | 38.0 | 2.57e-01 | 77.8% | 57.9% |
| 3538071 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.52 | 38.0 | 2.56e-01 | 76.8% | 46.8% |
| 3841970 | 6043.1.1.4 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 | 0.52 | 38.0 | 4.13e-01 | 77.8% | 98.8% |
| 3743229 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.52 | 38.0 | 2.53e-01 | 76.8% | 64.4% |
| 3937921 | 5.1.3.170 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd | 0.51 | 36.0 | 2.49e-01 | 72.7% | 35.5% |
| 3397300 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 39.0 | 2.82e-01 | 82.8% | 97.8% |
| 4949759 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.51 | 40.0 | 2.98e-01 | 87.9% | 91.7% |
| 3703426 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 36.0 | 2.50e-01 | 72.7% | 31.1% |
| 3244937 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 40.0 | 2.95e-01 | 96.0% | 31.7% |
| 3879259 | 5.1.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin | 0.50 | 40.0 | 3.16e-01 | 84.8% | 80.5% |
| 5080994 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 37.0 | 2.52e-01 | 75.8% | 54.7% |
| 3601975 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 35.0 | 2.43e-01 | 72.7% | 68.3% |
| 3668896 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 42.0 | 2.79e-01 | 94.9% | 85.3% |