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pre4_saliva_scaffold_3_prodigal-single.1__X__X__00059
Bact-Virpre4_saliva_scaffold_3_prodigal-single.1__X__X__00059
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-131
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cmyA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 51.0 | 5.03e-01 | 80.9% | 92.3% |
| 3au4A01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.62 | 56.0 | 4.89e-01 | 98.5% | 79.1% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 25.0 | 3.16e-01 | 90.1% | 57.8% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 25.0 | 3.17e-01 | 88.5% | 62.8% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 25.0 | 3.18e-01 | 87.8% | 66.7% |
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.56 | 30.0 | 3.42e-01 | 71.8% | 68.5% |
| 1zu2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 40.0 | 3.80e-01 | 80.2% | 73.4% |
| 1zvzA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 30.0 | 3.08e-01 | 99.2% | 58.1% |
| 7dswA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.52 | 38.0 | 2.77e-01 | 77.9% | 71.6% |
| 2gnxA01 | 1.10.3450.30 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › | 0.52 | 41.0 | 3.77e-01 | 87.0% | 93.9% |
| 2imsA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.51 | 36.0 | 3.37e-01 | 71.0% | 84.7% |
| 3k9iA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 32.0 | 3.51e-01 | 81.7% | 78.6% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 37.0 | 3.62e-01 | 77.1% | 95.9% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 38.0 | 3.64e-01 | 78.6% | 96.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3684493 | 109.4.1.213 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FancD2 | 0.66 | 53.0 | 3.90e-01 | 85.5% | 45.7% |
| 3962443 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.65 | 52.0 | 4.85e-01 | 84.7% | 92.5% |
| 3507460 | 109.4.1.1417 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CCP1_N | 0.62 | 49.0 | 3.81e-01 | 85.5% | 42.3% |
| 3738995 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.62 | 24.0 | 3.21e-01 | 92.4% | 64.6% |
| 3364502 | 109.54.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › UTP15_C | 0.62 | 46.0 | 4.43e-01 | 83.2% | 67.1% |
| 3934062 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 48.0 | 4.61e-01 | 84.0% | 74.7% |
| 3629379 | 3599.1.1.1 ↗ | alpha superhelices › Mitochondrial malonyl-CoA decarboxylase helical domain › Mitochondrial malonyl-CoA decarboxylase helical domain › Mitochondrial malonyl-CoA decarboxylase helical domain › MCD_N | 0.60 | 45.0 | 4.40e-01 | 77.1% | 98.6% |
| 3895354 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 4.74e-01 | 84.0% | 83.7% |
| 3635885 | 109.4.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA | 0.59 | 46.0 | 4.29e-01 | 84.0% | 76.5% |
| 3825782 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 39.0 | 3.89e-01 | 85.5% | 70.7% |
| 4617177 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.53 | 26.0 | 2.92e-01 | 84.0% | 58.0% |
| 4022775 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 43.0 | 2.90e-01 | 91.6% | 90.0% |
| 3565991 | 109.4.1.1415 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BCD_RFX | 0.51 | 42.0 | 3.27e-01 | 91.6% | 49.7% |
| 3327693 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.51 | 37.0 | 3.68e-01 | 80.2% | 73.3% |
| 5072615 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.50 | 26.0 | 2.78e-01 | 93.9% | 55.5% |
D2
medium
residues 132-295
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vldA02 | 1.25.40.580 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 46.0 | 4.78e-01 | 91.5% | 85.0% |
| 4qhpA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.59 | 49.0 | 3.95e-01 | 89.6% | 53.5% |
| 3wozB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 53.0 | 4.76e-01 | 100.0% | 81.2% |
| 2diwA01 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 46.0 | 4.91e-01 | 85.4% | 99.3% |
| 5mdtA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 47.0 | 4.86e-01 | 86.6% | 100.0% |
| 4gyoA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 40.0 | 3.66e-01 | 84.8% | 53.2% |
| 2lo6A00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 45.0 | 4.69e-01 | 87.2% | 96.8% |
| 4i9cA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 39.0 | 3.60e-01 | 86.6% | 54.3% |
| 3feyA02 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 50.0 | 4.77e-01 | 100.0% | 87.0% |
| 3u4tB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 39.0 | 3.43e-01 | 92.1% | 48.2% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 43.0 | 3.97e-01 | 86.0% | 76.2% |
| 3k62A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 48.0 | 3.62e-01 | 100.0% | 44.2% |
| 2pl2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 37.0 | 3.49e-01 | 83.5% | 62.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3477764 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 57.0 | 4.88e-01 | 100.0% | 92.5% |
| 3581659 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 39.0 | 3.80e-01 | 72.0% | 57.8% |
| 3194178 | 109.4.1.526 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc | 0.59 | 53.0 | 3.59e-01 | 100.0% | 47.1% |
| 3701140 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 47.0 | 4.45e-01 | 86.0% | 84.1% |
| 4949477 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.57 | 41.0 | 4.11e-01 | 74.4% | 88.2% |
| 3275755 | 109.4.1.435 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_N | 0.56 | 45.0 | 4.81e-01 | 89.0% | 97.9% |
| 3608568 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 47.0 | 3.94e-01 | 100.0% | 76.3% |
| 3504357 | 109.4.1.816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N | 0.52 | 46.0 | 4.15e-01 | 100.0% | 82.1% |