←Back to structures
pre4_saliva_scaffold_3_prodigal-single.1__X__X__00075
Bact-Virpre4_saliva_scaffold_3_prodigal-single.1__X__X__00075
Identity
- Kingdom:
- phage
Quality
71.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5lbmA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.83 | 74.0 | 6.67e-01 | 100.0% | 74.7% |
| 1qvrC04 | 6.10.140.130 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 66.0 | 5.36e-01 | 100.0% | 52.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3924041 | 605.1.1.212 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › 2TM_P5A-ATPase | 0.82 | 66.0 | 6.49e-01 | 93.3% | 81.5% |
| 3925175 | 5044.1.1.3 ↗ | extended segments › PsbZ-like › PsbZ-like › PsbZ-like › 2TM_P5A-ATPase | 0.76 | 63.0 | 6.22e-01 | 93.3% | 86.2% |
| 4017411 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.74 | 66.0 | 4.90e-01 | 100.0% | 54.7% |
| 4959128 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.69 | 54.0 | 5.01e-01 | 83.3% | 68.0% |
| 4323439 | 3238.1.1.2 ↗ | alpha superhelices › Mitochondrial mTERF-like › Mitochondrial mTERF › Mitochondrial mTERF › TAL_effector | 0.56 | 37.0 | 2.72e-01 | 70.0% | 57.2% |