←Back to structures

pre4_saliva_scaffold_3_prodigal-single.1__X__X__00098

Bact-Vir

pre4_saliva_scaffold_3_prodigal-single.1__X__X__00098

Identity

Kingdom:
phage

Quality

67.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-130
PDB
D2 medium residues 148-393
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13306.13 best LRR_5 40.6 3.20e-10 48.0% 68.5%
PF03382.21 DUF285 27.3 3.70e-06 45.1% 78.3%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h09D00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.77 62.0 5.29e-01 99.2% 54.4%
4gt6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.72 64.0 5.42e-01 91.5% 62.0%
4fd0A02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.72 67.0 6.19e-01 98.0% 94.4%
4fs7A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.70 65.0 5.50e-01 96.7% 65.3%
4cp6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.70 61.0 5.06e-01 91.1% 63.0%
4hq1A01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.66 58.0 5.42e-01 91.5% 82.6%
5z8xA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.65 58.0 5.24e-01 93.5% 73.5%
1xkuA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.65 56.0 5.17e-01 89.4% 76.7%
4bsrB01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.65 59.0 4.80e-01 97.6% 67.6%
1w8aA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.65 48.0 5.37e-01 85.0% 97.9%
2id5A01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.64 53.0 4.63e-01 86.2% 67.9%
2wfhA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.64 46.0 5.28e-01 84.6% 100.0%
2z66A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.63 54.0 4.98e-01 88.6% 72.2%
4u7lA01 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.62 57.0 5.19e-01 97.6% 77.3%
4rcaB00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.62 54.0 5.52e-01 92.3% 100.0%
4cnmA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.61 50.0 4.76e-01 84.6% 86.9%
5irlA02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.61 49.0 4.57e-01 83.7% 81.8%
1pgvA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.61 39.0 4.60e-01 81.7% 91.6%
3ogkH02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.59 48.0 3.77e-01 84.6% 48.4%
3wpcA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 52.0 3.69e-01 97.2% 41.6%
1gwbA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 51.0 5.01e-01 95.9% 90.6%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3820991 207.1.1.133 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 0.79 54.0 6.49e-01 88.6% 99.4%
3313101 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.78 39.0 5.63e-01 93.9% 100.0%
5033803 207.1.1.21 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.76 64.0 6.74e-01 89.8% 95.9%
3820315 207.1.1.96 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 0.75 57.0 6.31e-01 94.7% 96.0%
4148563 207.1.1.21 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 0.74 69.0 5.44e-01 98.4% 64.6%
3820895 207.1.1.174 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3 0.72 63.0 5.29e-01 92.7% 57.3%
5052837 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.71 50.0 5.23e-01 80.1% 76.5%
3433946 207.1.1.103 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.71 58.0 5.03e-01 85.4% 61.6%
3504259 207.1.1.141 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 0.71 66.0 5.73e-01 99.6% 82.7%
3827690 207.1.1.330 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3, LRR_14 0.70 64.0 5.78e-01 96.3% 80.3%
3297677 207.1.1.37 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.69 61.0 4.88e-01 91.1% 51.1%
3370058 207.1.1.104 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_Zer-1 0.69 54.0 4.92e-01 79.3% 66.0%
3433945 207.1.1.119 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 0.69 64.0 5.30e-01 96.7% 60.5%
3355196 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 56.0 5.81e-01 84.1% 92.6%
3468677 207.1.1.133 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 0.68 58.0 5.05e-01 91.1% 60.8%
3443114 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.68 58.0 5.94e-01 89.4% 92.7%
None — 0.68 60.0 6.11e-01 95.1% 93.5%
3677816 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.68 62.0 5.70e-01 96.3% 79.4%
3310662 207.1.1.190 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13 0.68 57.0 5.69e-01 87.4% 86.4%
5052324 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.67 61.0 4.85e-01 96.3% 51.0%
3307301 207.1.1.133 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 0.67 46.0 5.26e-01 84.6% 92.8%
3820471 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.67 60.0 6.09e-01 98.0% 95.5%
3830724 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.67 61.0 4.08e-01 96.3% 27.3%
3650897 207.1.1.103 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.66 53.0 5.69e-01 84.1% 94.9%
3460662 207.1.1.102 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.66 57.0 5.67e-01 91.1% 86.9%
3653832 207.1.1.103 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.66 58.0 4.10e-01 91.5% 43.1%
3897351 207.1.1.102 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.66 54.0 5.46e-01 90.2% 86.3%
3830228 207.1.1.480 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3, LRR_8, LRR_14 0.66 61.0 5.24e-01 96.3% 67.7%
3813714 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 62.0 4.57e-01 100.0% 63.5%
3361242 207.1.1.100 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8+LRR_14 0.66 55.0 5.71e-01 87.4% 93.9%
3452075 207.1.1.133 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 0.66 56.0 4.92e-01 92.7% 61.7%
None — 0.65 49.0 5.46e-01 87.4% 98.4%
1070221 207.1.1.241 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_5, LRR_6, LRR_8, LRR_9 0.65 59.0 4.82e-01 97.6% 67.8%
3381695 207.1.1.143 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 0.65 55.0 4.18e-01 89.4% 88.2%
3339743 207.1.1.104 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_Zer-1 0.65 57.0 5.67e-01 96.3% 88.8%
3443668 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.65 57.0 5.31e-01 96.3% 76.6%
None — 0.64 56.0 5.16e-01 90.2% 78.0%
3548840 207.1.1.130 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.64 55.0 5.35e-01 91.1% 85.8%
3297339 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.64 52.0 4.46e-01 85.0% 61.3%
3679984 207.1.1.103 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.64 54.0 4.60e-01 90.7% 57.1%
3356447 207.1.1.258 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WH_DRP 0.63 52.0 4.83e-01 86.6% 73.1%
3908970 207.1.1.55 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.63 55.0 4.70e-01 93.9% 70.0%
3887275 207.1.1.55 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.63 57.0 5.16e-01 96.7% 87.0%
3460660 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.63 47.0 5.25e-01 77.2% 99.5%
3596393 207.1.1.132 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 0.63 54.0 4.83e-01 90.2% 67.5%
3360863 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 52.0 4.42e-01 86.6% 57.4%
3865160 207.1.1.140 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 0.62 57.0 4.96e-01 99.2% 85.3%
3646657 207.1.1.143 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 0.62 52.0 4.97e-01 87.4% 78.6%
3752537 207.1.1.130 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.62 56.0 4.41e-01 96.7% 55.5%
3422978 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.62 52.0 4.27e-01 86.6% 57.9%
3111877 207.1.1.169 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_14 0.62 55.0 5.46e-01 97.2% 90.0%
4392821 207.1.1.237 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8, LRR_14 0.61 56.0 4.32e-01 98.4% 50.4%
3436765 207.1.1.143 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 0.61 50.0 4.97e-01 84.6% 82.2%
3461869 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.61 47.0 5.21e-01 81.7% 100.0%
3350096 207.1.1.242 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, LRR_8, DUF7885 0.60 52.0 4.42e-01 90.2% 60.5%
4825581 207.1.1.102 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.60 55.0 4.87e-01 100.0% 80.9%
3566811 207.1.1.130 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.60 55.0 5.14e-01 97.6% 80.0%
3389197 207.1.1.24 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.60 52.0 4.29e-01 90.7% 52.1%
None — 0.60 54.0 4.68e-01 96.7% 81.6%
3560221 207.1.1.237 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8, LRR_14 0.60 50.0 4.96e-01 91.5% 83.3%
4643072 207.1.1.102 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.59 53.0 4.76e-01 96.3% 69.6%
4450783 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 49.0 5.18e-01 89.8% 99.5%
3466831 207.1.1.318 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, LRR_8, LRR_14 0.58 50.0 3.82e-01 90.2% 42.0%
4494800 207.1.1.102 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.58 53.0 4.96e-01 97.2% 80.7%
3905318 207.1.1.24 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.58 53.0 4.85e-01 97.2% 77.1%
3752080 207.1.1.102 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.58 49.0 4.59e-01 88.6% 83.0%
3365392 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.58 46.0 4.86e-01 86.2% 93.0%
3463498 207.1.1.103 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.58 53.0 3.67e-01 100.0% 34.9%
3684326 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.58 46.0 4.76e-01 91.5% 87.7%
3892592 207.1.1.102 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.56 51.0 4.48e-01 97.2% 74.8%
3938506 207.1.1.130 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.56 48.0 4.69e-01 90.2% 82.2%
3468068 207.1.1.143 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 0.56 50.0 4.95e-01 95.9% 93.5%
3373679 207.1.1.320 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_8, LRR_14, LRR_R13L1-DRL21 0.55 48.0 4.90e-01 96.7% 95.7%