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pre4_saliva_scaffold_3_prodigal-single.1__X__X__00123
Bact-Virpre4_saliva_scaffold_3_prodigal-single.1__X__X__00123
Identity
- Kingdom:
- phage
Quality
77.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-191
Domain cluster:
rep: OP991903.1__WBF04831.1__X__00157__D16-183
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.75 | 58.0 | 6.08e-01 | 100.0% | 87.7% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.70 | 55.0 | 5.90e-01 | 99.4% | 94.5% |
| 3g16B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 28.0 | 3.02e-01 | 71.3% | 44.7% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.63 | 44.0 | 4.73e-01 | 100.0% | 81.6% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.63 | 29.0 | 4.10e-01 | 92.4% | 92.5% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 27.0 | 3.75e-01 | 100.0% | 82.1% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.56 | 33.0 | 3.98e-01 | 100.0% | 89.6% |
| 1foeC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 41.0 | 4.28e-01 | 98.8% | 82.6% |
| 5z0uA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 25.0 | 3.45e-01 | 72.5% | 84.4% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.52 | 28.0 | 3.25e-01 | 70.8% | 71.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5794 | 295.1.1.7 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP | 0.75 | 58.0 | 6.08e-01 | 100.0% | 87.7% |
| 5014277 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.71 | 22.0 | 3.23e-01 | 100.0% | 58.8% |
| 3242315 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.68 | 24.0 | 4.19e-01 | 98.2% | 100.0% |
| 3645476 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.67 | 39.0 | 4.98e-01 | 98.8% | 97.0% |
| 3699767 | 295.1.1.7 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP | 0.67 | 53.0 | 5.43e-01 | 100.0% | 86.7% |
| 4028363 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.67 | 26.0 | 3.47e-01 | 70.8% | 65.6% |
| 3594422 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.66 | 58.0 | 5.80e-01 | 100.0% | 90.9% |
| 5041112 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 22.0 | 3.31e-01 | 70.8% | 85.7% |
| 3258590 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.55 | 30.0 | 3.96e-01 | 91.2% | 96.8% |
| 4961766 | 241.15.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › Spo0M | 0.54 | 29.0 | 3.41e-01 | 72.5% | 73.9% |
| 4272597 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.54 | 31.0 | 3.44e-01 | 84.2% | 69.3% |
| 3784671 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 44.0 | 4.48e-01 | 98.2% | 90.9% |
| 4254174 | 4099.1.1.22 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P | 0.52 | 26.0 | 2.83e-01 | 71.9% | 53.8% |
| 3954692 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.51 | 29.0 | 3.54e-01 | 94.2% | 88.6% |
| 3288114 | 295.1.1.14 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF5984 | 0.50 | 45.0 | 3.95e-01 | 95.9% | 78.4% |