←Back to structures
pre4_saliva_scaffold_3_prodigal-single.1__X__X__00154
Bact-Virpre4_saliva_scaffold_3_prodigal-single.1__X__X__00154
Identity
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-52
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.55 | 41.0 | 3.37e-01 | 84.6% | 63.6% |
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 44.0 | 3.03e-01 | 94.2% | 57.7% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.52 | 42.0 | 3.39e-01 | 86.5% | 94.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3420021 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.80 | 46.0 | 3.40e-01 | 84.6% | 24.0% |
| 3408042 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.60 | 50.0 | 3.02e-01 | 94.2% | 58.7% |
| 3724437 | 327.11.2.44 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF28723 | 0.60 | 41.0 | 4.10e-01 | 73.1% | 74.5% |
| 5079119 | 604.39.1.6 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT | 0.57 | 49.0 | 3.20e-01 | 96.2% | 27.0% |
| 3992156 | 109.4.1.2569 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RasGEF_N_2, RICTOR_M, RICTOR_V | 0.53 | 46.0 | 2.80e-01 | 98.1% | 28.3% |
| 3179239 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.51 | 39.0 | 3.45e-01 | 88.5% | 94.1% |
| 4864568 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.51 | 36.0 | 3.03e-01 | 78.8% | 62.3% |
| 3976914 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.51 | 35.0 | 3.25e-01 | 75.0% | 54.3% |
| 3582740 | 5001.1.1.7 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Frizzled | 0.50 | 42.0 | 2.84e-01 | 98.1% | 63.6% |