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pre4_saliva_scaffold_3_prodigal-single.1__X__X__00183
Bact-Virpre4_saliva_scaffold_3_prodigal-single.1__X__X__00183
Identity
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-115
Domain cluster:
representative
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.75 | 49.0 | 5.75e-01 | 100.0% | 97.1% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.75 | 50.0 | 5.59e-01 | 90.3% | 87.7% |
| 2re1A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.74 | 51.0 | 5.83e-01 | 90.3% | 97.3% |
| 3b82A06 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 51.0 | 4.81e-01 | 93.2% | 60.3% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.73 | 54.0 | 5.88e-01 | 93.2% | 94.0% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.73 | 54.0 | 5.90e-01 | 99.0% | 94.1% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.73 | 52.0 | 5.77e-01 | 90.3% | 95.0% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 51.0 | 5.79e-01 | 90.3% | 98.7% |
| 2ca9A02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.72 | 53.0 | 5.70e-01 | 98.1% | 89.9% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 51.0 | 5.67e-01 | 91.3% | 94.9% |
| 3hluA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 48.0 | 5.54e-01 | 89.3% | 95.9% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 54.0 | 5.93e-01 | 100.0% | 97.6% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 52.0 | 5.60e-01 | 93.2% | 90.7% |
| 2cg8B02 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.71 | 61.0 | 5.59e-01 | 100.0% | 72.0% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 55.0 | 5.78e-01 | 99.0% | 90.4% |
| 2hiyA01 | 3.30.70.1280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains | 0.71 | 53.0 | 5.66e-01 | 98.1% | 90.9% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 50.0 | 5.64e-01 | 93.2% | 98.7% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 50.0 | 5.49e-01 | 93.2% | 93.8% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 51.0 | 5.59e-01 | 93.2% | 95.2% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.69 | 49.0 | 5.38e-01 | 91.3% | 89.4% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 52.0 | 5.64e-01 | 99.0% | 97.6% |
| 2cqiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 48.0 | 4.89e-01 | 90.3% | 73.8% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 53.0 | 5.73e-01 | 99.0% | 96.6% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 52.0 | 5.65e-01 | 99.0% | 97.6% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 52.0 | 5.53e-01 | 91.3% | 92.1% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 43.0 | 4.63e-01 | 89.3% | 77.6% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 49.0 | 5.18e-01 | 94.2% | 89.9% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.67 | 53.0 | 5.50e-01 | 87.4% | 91.5% |
| 2bvfA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.67 | 50.0 | 3.93e-01 | 94.2% | 38.6% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.66 | 57.0 | 5.44e-01 | 92.2% | 94.1% |
| 2ghpA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 47.0 | 5.14e-01 | 90.3% | 92.7% |
| 2e44A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 46.0 | 5.23e-01 | 100.0% | 100.0% |
| 2rt3A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 48.0 | 4.95e-01 | 100.0% | 81.4% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 52.0 | 5.22e-01 | 93.2% | 82.9% |
| 7dluA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 46.0 | 5.14e-01 | 81.6% | 96.2% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 48.0 | 5.08e-01 | 93.2% | 88.8% |
| 1a9nD00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 48.0 | 5.01e-01 | 90.3% | 84.9% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.65 | 54.0 | 5.36e-01 | 92.2% | 97.3% |
| 3lnlB02 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 48.0 | 5.16e-01 | 94.2% | 92.0% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.65 | 57.0 | 4.70e-01 | 96.1% | 92.9% |
| 4mt1A03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.65 | 55.0 | 5.62e-01 | 90.3% | 94.9% |
| 5wpjA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.65 | 54.0 | 5.32e-01 | 92.2% | 96.3% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 55.0 | 5.50e-01 | 93.2% | 91.6% |
| 5d4nC00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 49.0 | 5.04e-01 | 94.2% | 85.7% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 51.0 | 5.36e-01 | 94.2% | 95.7% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 51.0 | 5.22e-01 | 93.2% | 89.7% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 50.0 | 5.09e-01 | 92.2% | 86.9% |
| 4iyqA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 50.0 | 4.95e-01 | 93.2% | 81.3% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 51.0 | 5.16e-01 | 93.2% | 90.0% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 48.0 | 4.99e-01 | 92.2% | 88.4% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 48.0 | 4.87e-01 | 94.2% | 82.7% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 4.85e-01 | 93.2% | 80.4% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 51.0 | 5.04e-01 | 92.2% | 83.0% |
| 4h4kA01 | 3.30.70.2940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 47.0 | 5.00e-01 | 91.3% | 92.1% |
| 1q2lA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.62 | 55.0 | 4.27e-01 | 100.0% | 82.3% |
| 4ud8A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.61 | 46.0 | 3.82e-01 | 92.2% | 44.6% |
| 5d79A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.61 | 46.0 | 3.76e-01 | 91.3% | 43.3% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 50.0 | 5.22e-01 | 93.2% | 96.9% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.61 | 49.0 | 4.96e-01 | 87.4% | 91.4% |
| 3aqpA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 55.0 | 4.76e-01 | 100.0% | 95.6% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.61 | 54.0 | 4.29e-01 | 100.0% | 87.6% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 44.0 | 4.52e-01 | 93.2% | 80.4% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 51.0 | 5.15e-01 | 94.2% | 95.0% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 38.0 | 4.14e-01 | 99.0% | 78.0% |
| 3bh7B02 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.60 | 52.0 | 4.99e-01 | 100.0% | 81.8% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 52.0 | 5.17e-01 | 95.1% | 97.2% |
| 4nasB01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.60 | 53.0 | 5.13e-01 | 96.1% | 98.2% |
| 3vteA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.60 | 45.0 | 3.73e-01 | 92.2% | 44.3% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 4.17e-01 | 84.5% | 94.3% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 44.0 | 4.07e-01 | 82.5% | 92.8% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.57 | 52.0 | 4.19e-01 | 100.0% | 91.3% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 4.23e-01 | 95.1% | 82.6% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 34.0 | 3.73e-01 | 77.7% | 74.1% |
| 1cl7I00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 4.44e-01 | 99.0% | 93.9% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.56 | 47.0 | 4.67e-01 | 94.2% | 86.5% |
| 5kckA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.56 | 51.0 | 3.32e-01 | 100.0% | 29.7% |
| 3mtkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 50.0 | 4.32e-01 | 100.0% | 71.8% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.55 | 47.0 | 4.47e-01 | 94.2% | 80.2% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.15e-01 | 93.2% | 78.8% |
| 3v2uC02 | 3.30.70.3170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 43.0 | 4.49e-01 | 89.3% | 93.7% |
| 6ztgA01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.53 | 37.0 | 4.19e-01 | 91.3% | 98.7% |
| 5yuyA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 48.0 | 4.56e-01 | 100.0% | 88.5% |
| 2le1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 41.0 | 3.68e-01 | 86.4% | 96.0% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.52 | 37.0 | 3.38e-01 | 74.8% | 89.0% |
| 1xdzA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 41.0 | 3.21e-01 | 87.4% | 59.7% |
| 3lurA00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.51 | 36.0 | 3.14e-01 | 90.3% | 48.1% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.76 | 52.0 | 5.78e-01 | 89.3% | 90.0% |
| 4959045 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.74 | 58.0 | 5.12e-01 | 93.2% | 57.3% |
| 3737548 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.74 | 53.0 | 5.22e-01 | 91.3% | 70.4% |
| 4226508 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.73 | 55.0 | 5.98e-01 | 98.1% | 95.3% |
| 4928850 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 51.0 | 5.42e-01 | 92.2% | 82.2% |
| 5012647 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.73 | 50.0 | 5.75e-01 | 90.3% | 96.0% |
| 5033448 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.73 | 49.0 | 5.22e-01 | 92.2% | 78.9% |
| 4422520 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.72 | 50.0 | 4.95e-01 | 93.2% | 67.3% |
| 4997522 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.72 | 53.0 | 5.89e-01 | 100.0% | 98.8% |
| 5028017 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 51.0 | 5.34e-01 | 100.0% | 80.0% |
| 4935238 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.72 | 50.0 | 5.58e-01 | 91.3% | 93.7% |
| 3941895 | 304.8.1.43 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_5 | 0.72 | 49.0 | 5.56e-01 | 88.3% | 96.0% |
| 4062392 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.72 | 49.0 | 4.98e-01 | 93.2% | 72.0% |
| 4954911 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.71 | 52.0 | 5.70e-01 | 94.2% | 92.9% |
| 4223968 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.71 | 48.0 | 5.37e-01 | 93.2% | 90.0% |
| 5048300 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.71 | 50.0 | 4.97e-01 | 93.2% | 70.5% |
| 4982133 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.71 | 48.0 | 5.35e-01 | 93.2% | 90.0% |
| 5066425 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.71 | 48.0 | 5.36e-01 | 93.2% | 90.0% |
| 4983809 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.70 | 51.0 | 5.65e-01 | 90.3% | 98.8% |
| 4413471 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.70 | 47.0 | 5.35e-01 | 93.2% | 94.7% |
| 4948793 | 304.134.1.3 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › PF26798 | 0.70 | 52.0 | 5.78e-01 | 98.1% | 98.8% |
| 5053714 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 51.0 | 4.70e-01 | 93.2% | 58.5% |
| 3503234 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.70 | 59.0 | 5.57e-01 | 91.3% | 91.9% |
| 5250 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 51.0 | 5.56e-01 | 93.2% | 92.9% |
| 3932886 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 58.0 | 6.01e-01 | 93.2% | 96.8% |
| 5051021 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 49.0 | 5.15e-01 | 98.1% | 80.0% |
| 3933395 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.69 | 51.0 | 5.53e-01 | 94.2% | 94.1% |
| 5015637 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.69 | 47.0 | 5.20e-01 | 91.3% | 90.0% |
| 3590219 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.69 | 48.0 | 5.11e-01 | 93.2% | 83.3% |
| 5028585 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.68 | 50.0 | 5.40e-01 | 91.3% | 92.9% |
| 4189564 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.68 | 52.0 | 5.57e-01 | 93.2% | 95.5% |
| 5007296 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.68 | 52.0 | 5.51e-01 | 99.0% | 92.2% |
| 4044908 | 304.8.1.62 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › CitX | 0.67 | 58.0 | 4.84e-01 | 100.0% | 55.9% |
| 3272592 | 317.1.1.1 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › IF4E | 0.67 | 55.0 | 4.57e-01 | 93.2% | 49.7% |
| 5035799 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.67 | 58.0 | 5.45e-01 | 93.2% | 79.0% |
| 5055256 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.67 | 50.0 | 5.41e-01 | 100.0% | 94.1% |
| 4001734 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.67 | 58.0 | 5.64e-01 | 94.2% | 93.9% |
| 4240079 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.67 | 53.0 | 5.42e-01 | 92.2% | 87.0% |
| 3789211 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.67 | 48.0 | 4.88e-01 | 94.2% | 77.0% |
| 3883294 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.67 | 56.0 | 5.16e-01 | 90.3% | 90.8% |
| 3924669 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 55.0 | 5.73e-01 | 96.1% | 97.9% |
| 1146572 | 304.152.1.1 ↗ | a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 | 0.66 | 57.0 | 5.48e-01 | 92.2% | 95.7% |
| 5069977 | 304.128.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB › FtsX | 0.66 | 49.0 | 3.09e-01 | 100.0% | 14.3% |
| 4025816 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 52.0 | 5.45e-01 | 100.0% | 92.6% |
| 4304504 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.66 | 47.0 | 4.84e-01 | 93.2% | 78.0% |
| 3191368 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.66 | 57.0 | 5.32e-01 | 94.2% | 91.2% |
| 4618631 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.65 | 47.0 | 5.12e-01 | 93.2% | 91.8% |
| 5064606 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.65 | 54.0 | 5.33e-01 | 92.2% | 96.4% |
| 3735153 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 54.0 | 5.28e-01 | 91.3% | 87.0% |
| 4943953 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.65 | 54.0 | 5.27e-01 | 92.2% | 92.2% |
| 3992335 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 55.0 | 5.59e-01 | 92.2% | 94.0% |
| 4933653 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.65 | 54.0 | 5.22e-01 | 92.2% | 92.2% |
| 2846995 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.64 | 52.0 | 5.46e-01 | 92.2% | 97.8% |
| 5043269 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.64 | 46.0 | 4.94e-01 | 93.2% | 90.6% |
| 2756612 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.64 | 53.0 | 5.10e-01 | 92.2% | 95.1% |
| 4033568 | 325.1.1.13 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › PF29932 | 0.64 | 42.0 | 4.99e-01 | 81.6% | 100.0% |
| 5028388 | 304.4.1.86 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › PF27325 | 0.64 | 51.0 | 5.35e-01 | 97.1% | 93.7% |
| 3232837 | 304.4.1.15 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP | 0.63 | 54.0 | 5.34e-01 | 93.2% | 87.3% |
| 4503821 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.63 | 42.0 | 4.82e-01 | 86.4% | 100.0% |
| 4025874 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 52.0 | 5.17e-01 | 93.2% | 87.6% |
| 3765409 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.62 | 53.0 | 5.17e-01 | 93.2% | 88.7% |
| 3545806 | 509.1.1.15 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › SGT1 | 0.62 | 55.0 | 4.52e-01 | 100.0% | 53.7% |
| 3773609 | 304.15.1.6 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain › SGT1 | 0.62 | 55.0 | 4.51e-01 | 100.0% | 53.7% |
| 4959304 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 51.0 | 4.89e-01 | 91.3% | 89.2% |
| 4025670 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 53.0 | 5.10e-01 | 95.1% | 90.0% |
| 3901446 | 304.4.1.15 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP | 0.61 | 50.0 | 5.06e-01 | 92.2% | 87.6% |
| 3491594 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.61 | 54.0 | 5.18e-01 | 100.0% | 85.8% |
| 3622609 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 54.0 | 5.20e-01 | 100.0% | 91.3% |
| 3601652 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 54.0 | 5.24e-01 | 100.0% | 89.6% |
| 4162002 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.59 | 40.0 | 3.38e-01 | 92.2% | 40.0% |
| 3175129 | 6169.1.1.45 ↗ | extended segments › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › PF27810 | 0.59 | 49.0 | 4.73e-01 | 90.3% | 93.9% |
| 3164823 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.59 | 51.0 | 4.04e-01 | 100.0% | 83.0% |
| 3309373 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.59 | 45.0 | 4.85e-01 | 89.3% | 97.6% |
| 3719042 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.58 | 50.0 | 3.94e-01 | 97.1% | 67.8% |
| 4405647 | 304.61.1.2 ↗ | a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Monooxy_af470-like | 0.58 | 51.0 | 4.11e-01 | 96.1% | 54.5% |
| 3967987 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 49.0 | 4.79e-01 | 91.3% | 84.5% |
| 4280669 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.58 | 49.0 | 4.44e-01 | 94.2% | 66.9% |
| 5081920 | 304.160.1.1 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF | 0.58 | 48.0 | 4.45e-01 | 91.3% | 92.6% |
| 4988226 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.58 | 46.0 | 4.91e-01 | 100.0% | 97.8% |
| 2388574 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.58 | 50.0 | 3.99e-01 | 100.0% | 83.5% |
| 4028639 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.58 | 48.0 | 3.69e-01 | 91.3% | 40.4% |
| 3609518 | 101.1.1.491 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › FAZ1_cons | 0.57 | 45.0 | 4.61e-01 | 84.5% | 91.0% |
| 5012937 | 304.116.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor › acVLRF1 | 0.57 | 47.0 | 4.91e-01 | 98.1% | 96.8% |
| 3896678 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.57 | 46.0 | 4.42e-01 | 88.3% | 94.2% |
| 3179676 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 45.0 | 3.15e-01 | 85.4% | 42.9% |
| 4990439 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.57 | 47.0 | 4.79e-01 | 98.1% | 92.0% |
| 3782560 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 47.0 | 4.19e-01 | 91.3% | 65.1% |
| 5075710 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.56 | 47.0 | 4.16e-01 | 92.2% | 88.0% |
| 271678 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.55 | 47.0 | 4.33e-01 | 94.2% | 72.9% |
| 4281582 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.55 | 48.0 | 4.59e-01 | 99.0% | 84.8% |
| 2512800 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.55 | 47.0 | 4.29e-01 | 94.2% | 70.8% |
| 3813077 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.54 | 46.0 | 3.38e-01 | 98.1% | 34.2% |
| 3991153 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 41.0 | 2.94e-01 | 78.6% | 31.9% |
| 5005078 | 304.48.1.113 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › mCpol | 0.53 | 48.0 | 4.56e-01 | 100.0% | 95.2% |
| 1786500 | 304.9.1.75 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF8436 | 0.52 | 35.0 | 3.83e-01 | 100.0% | 88.6% |
| 5050119 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.50 | 40.0 | 4.21e-01 | 100.0% | 97.8% |
D2
high
residues 127-196
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7kz9A02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.65 | 55.0 | 3.99e-01 | 97.1% | 100.0% |
| 1s5jA03 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.57 | 38.0 | 2.99e-01 | 70.0% | 76.4% |
| 3uaqB01 | 2.40.128.250 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 47.0 | 4.12e-01 | 100.0% | 92.7% |
| 3o2sB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 45.0 | 3.72e-01 | 97.1% | 62.7% |
| 1zbuB01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.52 | 42.0 | 4.20e-01 | 95.7% | 89.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3513859 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 35.0 | 3.82e-01 | 100.0% | 96.0% |
| 3917353 | 11.1.1.375 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,MG2,A2M_BRD | 0.51 | 44.0 | 2.62e-01 | 100.0% | 83.1% |