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probable_capsid_protein_2
Euk-VirAcanthamoeba_polyphaga_mimivirus
probable_capsid_protein_2__YP_003986946__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986946 ↗
- Protein ID:
- probable_capsid_protein_2
- Kingdom:
- euk
Quality
75.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 92-252
D2
medium
residues 46-83_253-413
Domain cluster:
rep: major_capsid_protein__YP_009508644__Common_midwife_toad_virus__540070__D48-85_114-155_177-212_243-266
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16903.13 best | Capsid_N | 133.9 | 8.00e-39 | 93.0% | 88.9% |
D3
medium
residues 414-587
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04451.18 best | Capsid_NCLDV | 163.7 | 6.20e-48 | 98.9% | 93.9% |