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probable_capsid_protein_4
Euk-VirAcanthamoeba_polyphaga_mimivirus
probable_capsid_protein_4__YP_003986948__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986948 ↗
- Protein ID:
- probable_capsid_protein_4
- Kingdom:
- euk
Quality
78.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (126 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-201_306-332
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16903.13 best | Capsid_N | 131.4 | 4.90e-38 | 94.8% | 94.2% |
D2
high
residues 208-257_274-295
D3
medium
residues 333-512
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04451.18 best | Capsid_NCLDV | 191.5 | 1.90e-56 | 96.1% | 95.9% |