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probable_ubiquitin_carboxyl-terminal_hydrolase

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

probable_ubiquitin_carboxyl-terminal_hydrolase__YP_003986822__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986822 ↗
Protein ID:
probable_ubiquitin_carboxyl-terminal_hydrolase
Kingdom:
euk

Quality

71.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-193
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00443.36 best UCH 61.5 1.40e-16 87.9% 41.7%
D2 medium residues 202-274
PDB
D3 medium residues 275-468
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13423.13 best UCH_1 30.2 5.00e-07 85.0% 56.1%
PF00443.36 UCH 96.7 2.50e-27 82.0% 49.2%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3i3tA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.93 81.0 6.71e-01 96.9% 56.8%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.92 82.0 6.84e-01 96.4% 58.7%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.87 79.0 6.59e-01 96.9% 60.3%
5gviA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.86 81.0 6.62e-01 96.4% 65.4%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.86 81.0 6.53e-01 97.4% 63.3%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.85 80.0 6.65e-01 96.9% 61.0%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.84 72.0 6.00e-01 97.9% 55.4%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.84 76.0 6.11e-01 97.9% 53.7%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.83 72.0 5.83e-01 99.5% 52.0%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.82 79.0 6.38e-01 99.5% 61.7%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.81 74.0 6.19e-01 97.9% 60.1%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.81 66.0 5.58e-01 97.4% 54.3%
4czwA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.77 73.0 5.65e-01 100.0% 53.3%
7w3rB01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 70.0 5.74e-01 98.5% 59.9%
4q8gA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.72 68.0 5.54e-01 100.0% 58.1%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.72 48.0 5.56e-01 97.4% 93.4%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 24.0 3.12e-01 71.6% 75.0%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.51 27.0 3.58e-01 74.7% 95.9%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3469952 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.95 88.0 6.97e-01 97.4% 53.4%
3718923 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.94 84.0 6.72e-01 96.4% 52.1%
3487286 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.93 86.0 6.80e-01 99.0% 52.6%
3484542 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.93 82.0 6.62e-01 97.4% 53.0%
3237895 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.93 86.0 6.97e-01 99.0% 56.1%
3864688 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.93 87.0 6.90e-01 100.0% 53.9%
3247609 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.93 76.0 6.01e-01 96.4% 46.3%
3622020 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.93 84.0 6.89e-01 99.5% 56.6%
3502530 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.93 83.0 6.74e-01 99.0% 55.3%
3679910 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.92 84.0 8.16e-01 96.9% 86.2%
3911651 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.92 86.0 6.83e-01 99.0% 53.4%
3529004 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.92 86.0 6.92e-01 97.9% 56.1%
3991880 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.92 88.0 6.79e-01 99.0% 51.2%
3361220 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.92 84.0 6.50e-01 97.9% 48.5%
4369043 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.92 89.0 7.05e-01 99.0% 58.4%
3510146 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.92 87.0 6.80e-01 100.0% 52.5%
4000435 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 89.0 6.79e-01 100.0% 55.8%
3717786 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 89.0 6.33e-01 100.0% 60.5%
3408112 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 78.0 6.33e-01 100.0% 52.3%
3610290 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 87.0 6.55e-01 99.0% 54.0%
3940305 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 89.0 8.40e-01 100.0% 91.4%
3362301 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 84.0 6.78e-01 97.9% 55.9%
3710203 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 88.0 6.41e-01 99.0% 57.0%
3842107 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 83.0 6.69e-01 99.5% 55.3%
3608005 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.91 82.0 6.61e-01 99.0% 54.0%
3639762 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 87.0 6.58e-01 99.5% 54.3%
3890729 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 88.0 6.68e-01 100.0% 54.3%
3912023 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 85.0 7.00e-01 96.4% 61.3%
4101918 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 86.0 6.61e-01 97.4% 52.3%
4076563 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 74.0 6.14e-01 99.5% 52.6%
3568385 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.90 83.0 6.86e-01 100.0% 58.7%
3517484 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 87.0 6.79e-01 100.0% 53.8%
4003825 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 87.0 6.56e-01 99.0% 51.5%
3508437 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 85.0 6.71e-01 97.4% 55.5%
3913807 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.90 81.0 6.89e-01 97.4% 62.1%
3804059 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 75.0 6.25e-01 100.0% 54.4%
3807424 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.90 80.0 6.52e-01 96.9% 54.8%
3594089 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.90 83.0 6.69e-01 97.4% 55.8%
3903582 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.90 84.0 6.64e-01 96.9% 55.2%
3614286 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 84.0 6.70e-01 96.4% 55.0%
3177128 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 84.0 6.43e-01 100.0% 47.8%
3997372 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 87.0 6.70e-01 100.0% 53.6%
3737025 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 85.0 6.69e-01 99.0% 53.5%
3993647 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 78.0 6.43e-01 100.0% 55.2%
3928073 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 83.0 6.73e-01 99.0% 57.3%
3246005 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 73.0 5.94e-01 99.0% 49.5%
4208849 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 66.0 7.62e-01 82.5% 98.6%
3814705 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 83.0 6.61e-01 96.9% 53.4%
3563057 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 86.0 6.02e-01 100.0% 50.6%
3652683 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 86.0 6.62e-01 100.0% 60.5%
3789028 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.89 83.0 6.33e-01 96.4% 55.2%
3404995 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 81.0 6.33e-01 99.5% 51.0%
3596871 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.88 85.0 6.27e-01 99.0% 55.8%
3636498 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 83.0 6.61e-01 96.9% 57.1%
4011568 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 77.0 6.17e-01 99.5% 51.6%
3750815 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 85.0 6.56e-01 99.5% 58.2%
3794507 221.1.1.99 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UCH 0.88 85.0 5.95e-01 100.0% 49.2%
3251132 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 84.0 6.53e-01 97.9% 56.7%
3479667 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.88 85.0 6.56e-01 100.0% 62.7%
3768984 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 84.0 6.38e-01 99.5% 49.9%
3498631 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 82.0 6.25e-01 96.9% 55.5%
4024247 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 84.0 6.50e-01 99.0% 63.8%
3179039 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 84.0 6.44e-01 99.0% 50.4%
3272442 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 79.0 6.46e-01 99.5% 56.0%
3630851 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 84.0 6.34e-01 99.0% 48.2%
3783065 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 80.0 6.24e-01 96.4% 50.4%
3254669 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 84.0 6.03e-01 100.0% 54.8%
4183759 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 84.0 6.03e-01 100.0% 43.1%
3600084 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.87 82.0 7.01e-01 97.9% 77.8%
3388829 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 84.0 6.26e-01 100.0% 53.8%
3320676 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.87 84.0 6.41e-01 99.5% 52.2%
3358397 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.86 84.0 6.41e-01 100.0% 51.7%
3874531 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.86 83.0 5.97e-01 100.0% 57.7%
3426676 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.86 82.0 6.46e-01 97.9% 53.5%
3532456 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.86 71.0 6.04e-01 92.8% 57.2%
3854364 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.86 83.0 6.23e-01 100.0% 54.2%
3218874 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.86 83.0 5.77e-01 100.0% 45.2%
3699312 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.86 82.0 6.12e-01 100.0% 60.8%
4024708 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.85 80.0 6.24e-01 97.4% 52.5%
4324895 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.85 83.0 5.22e-01 100.0% 26.4%
3470395 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.85 83.0 7.70e-01 100.0% 90.9%
3236879 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.85 82.0 6.37e-01 100.0% 55.9%
3723169 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.85 76.0 6.08e-01 100.0% 52.2%
3485620 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.84 78.0 6.26e-01 96.9% 59.5%
3401777 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.83 78.0 6.10e-01 96.9% 56.4%
3922974 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.83 77.0 6.11e-01 97.4% 64.2%
3390045 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.82 78.0 6.23e-01 99.0% 56.2%
3481243 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.82 77.0 5.97e-01 97.4% 55.5%
3217832 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.82 76.0 6.22e-01 100.0% 57.5%
3303851 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.81 74.0 6.03e-01 97.4% 55.5%
4605731 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.81 74.0 5.79e-01 100.0% 49.9%
None 0.81 76.0 5.59e-01 100.0% 42.0%
3880439 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.80 77.0 5.49e-01 100.0% 63.6%
None 0.80 78.0 5.75e-01 100.0% 46.7%
4023904 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.79 76.0 5.73e-01 100.0% 48.5%
3411408 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.78 76.0 5.44e-01 100.0% 45.7%
3688269 219.1.1.50 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 0.77 73.0 5.21e-01 100.0% 42.9%
4061222 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.77 73.0 4.70e-01 100.0% 27.0%
2410435 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.75 72.0 5.63e-01 100.0% 53.1%