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protease

Euk-Vir

Chrysothrix_chrysovirus_1

protease__YP_010088086__Chrysothrix_chrysovirus_1__2682569

Identity

Accession:
YP_010088086 ↗
Protein ID:
protease
Kingdom:
euk

Quality

71.2 mean pLDDT

Taxonomy

Orthornavirae› Duplornaviricota› Chrymotiviricetes› Ghabrivirales› Chrysoviridae› Alphachrysovirus› Chrysothrix_chrysovirus_1

TaxID: 2682569

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 668-836
PDB
Domain cluster: rep: putative_cysteine_protease__YP_009507945__Cryphonectria_nitschkei_chrysovirus_1__399394__D661-822
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4boqA00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.71 51.0 5.04e-01 72.2% 89.7%
3by4A00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.66 51.0 5.11e-01 78.7% 92.4%
4bouA00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.65 48.0 5.24e-01 75.1% 95.0%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3437850 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.73 54.0 4.72e-01 75.1% 100.0%
3270187 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.73 54.0 5.57e-01 75.1% 97.5%
3599196 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.73 55.0 4.80e-01 77.5% 99.2%
3699179 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.73 54.0 4.71e-01 76.3% 98.4%
3421427 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.72 54.0 4.70e-01 76.9% 98.8%
3997800 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.72 53.0 4.53e-01 75.7% 99.6%
3694610 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.71 54.0 4.59e-01 76.9% 98.8%
4012196 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.71 54.0 4.57e-01 76.9% 95.3%
3234408 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.71 53.0 4.57e-01 76.9% 91.0%
3475191 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.71 52.0 5.20e-01 74.0% 97.6%
3664077 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.71 51.0 4.99e-01 73.4% 95.6%
3593332 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.70 50.0 5.09e-01 72.2% 95.8%
3656055 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.70 55.0 4.51e-01 79.9% 94.3%
3707160 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.70 50.0 5.22e-01 73.4% 98.8%
3784827 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.69 53.0 5.05e-01 78.7% 93.7%
4030106 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.67 50.0 5.08e-01 75.7% 86.5%
3697095 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.67 51.0 5.04e-01 78.1% 94.3%
3245933 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.66 48.0 5.31e-01 73.4% 100.0%
4022826 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.66 51.0 5.10e-01 78.7% 95.9%
1165753 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.66 51.0 5.03e-01 78.7% 90.9%
3488478 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.65 55.0 4.46e-01 87.6% 91.3%
3879628 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.65 55.0 4.20e-01 87.6% 82.0%
3401495 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.65 48.0 4.87e-01 75.1% 80.6%
3924649 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.63 55.0 4.31e-01 89.9% 74.8%
3533545 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.63 54.0 4.07e-01 89.9% 73.7%
3840704 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.63 47.0 4.46e-01 75.7% 71.5%
4001526 219.1.1.15 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU 0.63 53.0 4.13e-01 88.2% 72.5%
4521594 219.1.1.48 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 0.63 48.0 4.22e-01 78.1% 90.8%
5061293 219.1.1.77 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 0.59 47.0 4.31e-01 82.2% 99.1%
D2 medium residues 39-112_151-370
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1031169 3709.1.1.1 ↗ a+b two layers › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › T7SS_ESX1_EccB 0.59 9.0 2.83e-01 86.1% 88.4%
D3 medium residues 371-479_547-565
PDB
Domain cluster: rep: putative_protease__YP_009667013__Colletotrichum_gloeosporioides_chrysovirus_1__1766766__D375-490_505-564
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nxcA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 39.0 3.53e-01 72.7% 55.9%
3mvpA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 38.0 3.67e-01 72.7% 71.1%
2g3bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 38.0 3.36e-01 71.9% 56.7%
3tp3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 38.0 3.64e-01 71.9% 71.6%
2cfqA01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.50 37.0 3.20e-01 76.6% 87.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3551714 592.6.1.2 ↗ alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › PF26582 0.61 29.0 3.19e-01 70.3% 53.3%
4977987 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.53 37.0 3.71e-01 71.9% 77.7%
3289810 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.50 37.0 3.26e-01 77.3% 87.5%
3979214 5050.1.1.22 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1_like 0.50 38.0 3.36e-01 78.1% 95.7%
D4 medium residues 480-546
PDB
D5 medium residues 566-616
PDB