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protease_nsp2

Euk-Vir

Madariaga_virus

protease_nsp2__YP_009020584__Madariaga_virus__1440170

Identity

Accession:
YP_009020584 ↗
Protein ID:
protease_nsp2
Kingdom:
euk

Quality

90.7 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Togaviridae› Alphavirus› Madariaga_virus

TaxID: 1440170

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-170
PDB
Domain cluster: rep: nsP2__NP_818996__Barmah_Forest_virus__11020__D20-65_67-162
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20896.3 best ToMV_Hel_N 211.2 1.30e-62 89.9% 95.6%
D2 high residues 181-306
PDB
Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01443.25 best Viral_helicase1 65.5 9.00e-18 99.2% 49.1%
PF13604.13 AAA_30 30.7 3.70e-07 83.3% 55.5%
D3 high residues 476-591
PDB
Domain cluster: rep: nsP2_protein__NP_740650__Eastern_equine_encephalitis_virus__11021__D477-591
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01707.23 best Peptidase_C9 145.5 2.40e-42 100.0% 57.4%
D4 high residues 622-785
PDB
Domain cluster: rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
D5 medium residues 351-436
PDB
Domain cluster: rep: TGB1_protein__NP_619560__Garlic_latent_virus__12458__D129-228