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protein_3D
Euk-VirEncephalomyocarditis_virus
protein_3D__NP_740411__Encephalomyocarditis_virus__12104
Identity
- Accession:
- NP_740411 ↗
- Protein ID:
- protein_3D
- Kingdom:
- euk
Quality
94.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Picornaviridae›
Cardiovirus›
Encephalomyocarditis_virus
TaxID: 12104
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 382-457
Domain cluster:
rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 37.2 | 2.10e-09 | 81.6% | 13.6% |
D2
medium
residues 1-65_77-209_241-296
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 125.5 | 3.50e-36 | 69.7% | 44.0% |
D3
medium
residues 66-76_210-240_297-381
Domain cluster:
rep: RNA_dependent_RNA_polymerase__YP_529897__Newbury_agent_1__331642__D58-79_192-241_281-399
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 71.9 | 6.50e-20 | 66.9% | 20.2% |
| PF00680.26 | RdRP_1 | 27.8 | 1.60e-06 | 33.9% | 8.9% |