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protein_Allo54
Euk-VirCyprinid_herpesvirus_2
protein_Allo54__YP_007003881__Cyprinid_herpesvirus_2__317878
Identity
- Accession:
- YP_007003881 ↗
- Protein ID:
- protein_Allo54
- Kingdom:
- euk
Quality
50.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_2
TaxID: 317878
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-64_125-228
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ry6A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 36.0 | 3.47e-01 | 84.8% | 54.9% |
| 3g98A00 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 37.0 | 4.00e-01 | 94.9% | 87.4% |
| 1yb2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 3.14e-01 | 72.5% | 71.3% |
| 4j5tA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 44.0 | 3.11e-01 | 94.2% | 77.6% |
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 25.0 | 2.93e-01 | 85.5% | 63.8% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 33.0 | 3.39e-01 | 91.3% | 64.9% |
| 3oxnA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 38.0 | 4.12e-01 | 88.4% | 93.0% |
| 1k1gA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 28.0 | 3.00e-01 | 92.8% | 59.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970430 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.64 | 36.0 | 4.02e-01 | 87.7% | 68.2% |
| 3973484 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.61 | 34.0 | 3.83e-01 | 87.7% | 71.0% |
| 3223768 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.60 | 23.0 | 3.17e-01 | 84.1% | 67.7% |
| 2740980 | 3739.1.1.1 ↗ | beta sandwiches › TraO N-terminal domain › TraO N-terminal domain › TraO N-terminal domain › CagX | 0.59 | 30.0 | 3.94e-01 | 71.7% | 94.3% |
| 3543655 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.53 | 37.0 | 3.21e-01 | 71.0% | 89.5% |
| 3539999 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.52 | 37.0 | 3.44e-01 | 71.7% | 82.9% |
| 3914941 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.51 | 47.0 | 3.58e-01 | 100.0% | 79.7% |
| 3204288 | 327.11.2.68 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Mug60-KHD4, PF29984, PF29998 | 0.50 | 37.0 | 2.57e-01 | 75.4% | 80.0% |
D2
medium
residues 303-482
D3
medium
residues 555-657