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protein_Allo64
Euk-VirCyprinid_herpesvirus_2
protein_Allo64__YP_007003868__Cyprinid_herpesvirus_2__317878
Identity
- Accession:
- YP_007003868 ↗
- Protein ID:
- protein_Allo64
- Kingdom:
- euk
Quality
49.1
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_2
TaxID: 317878
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 356-502_520-550
D2
medium
residues 16-172
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ejrA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.80 | 34.0 | 3.12e-01 | 86.0% | 32.3% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.60 | 35.0 | 3.87e-01 | 83.4% | 71.9% |
| 4gyoB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 41.0 | 4.37e-01 | 100.0% | 82.7% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.57 | 32.0 | 3.69e-01 | 73.9% | 73.5% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.56 | 39.0 | 4.04e-01 | 93.6% | 74.2% |
| 4qhpA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.56 | 51.0 | 4.00e-01 | 99.4% | 69.7% |
| 4qreA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.55 | 40.0 | 3.90e-01 | 94.3% | 67.6% |
| 4g80T00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.55 | 37.0 | 3.92e-01 | 86.0% | 77.0% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.55 | 35.0 | 3.77e-01 | 86.0% | 73.7% |
| 5jc3A02 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.53 | 35.0 | 3.84e-01 | 87.3% | 82.5% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 27.0 | 3.34e-01 | 89.8% | 81.9% |
| 2h7oA01 | 1.20.120.1330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain | 0.50 | 34.0 | 3.81e-01 | 77.7% | 87.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3347270 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.64 | 30.0 | 3.62e-01 | 77.7% | 65.7% |
| 3223802 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 37.0 | 3.98e-01 | 84.1% | 70.4% |
| 4951260 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.56 | 36.0 | 3.84e-01 | 86.0% | 72.1% |
| 4166581 | 140.1.1.6 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1,tRNA-synt_1g | 0.56 | 37.0 | 3.30e-01 | 82.8% | 46.9% |
| 3665523 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 3.69e-01 | 86.0% | 58.0% |
| 4996244 | 3813.1.1.2 ↗ | alpha bundles › DUF416 › DUF416 › DUF416 › Imm5_like | 0.55 | 37.0 | 3.65e-01 | 98.1% | 63.5% |
| 4527333 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.55 | 32.0 | 3.46e-01 | 77.7% | 66.7% |
| 3630360 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.55 | 31.0 | 3.18e-01 | 72.6% | 56.0% |
| 4254173 | 140.1.1.15 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g | 0.53 | 37.0 | 3.37e-01 | 90.4% | 50.9% |
| 5051929 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 39.0 | 3.40e-01 | 74.5% | 55.7% |
| 4123282 | 109.4.1.3084 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27421 | 0.53 | 37.0 | 3.93e-01 | 94.3% | 82.2% |
| 4086945 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.52 | 26.0 | 2.64e-01 | 79.0% | 46.3% |
| 3456183 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 33.0 | 3.95e-01 | 79.6% | 99.0% |
| 4075542 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.51 | 33.0 | 3.71e-01 | 98.7% | 83.2% |
| 4980072 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 42.0 | 4.29e-01 | 90.4% | 93.0% |