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protein_G49

Euk-Vir

Equid_gammaherpesvirus_5

protein_G49__YP_009118439__Equid_gammaherpesvirus_5__10371

Identity

Accession:
YP_009118439 ↗
Protein ID:
protein_G49
Kingdom:
euk

Quality

81.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Equid_gammaherpesvirus_5

TaxID: 10371

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 155-225
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04793.18 best Herpes_BBRF1 50.8 1.90e-13 98.6% 24.1%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v4aA01 1.10.4050.10 Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE 0.77 59.0 5.05e-01 88.7% 53.2%
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.76 65.0 5.69e-01 95.8% 83.2%
4zvaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.75 65.0 5.07e-01 94.4% 85.9%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.74 64.0 5.15e-01 97.2% 88.5%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.71 63.0 5.59e-01 100.0% 92.2%
3cyjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.70 52.0 4.42e-01 97.2% 47.5%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.70 62.0 4.89e-01 100.0% 92.6%
2bvlA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 57.0 5.37e-01 94.4% 90.7%
4dwlA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.68 59.0 5.21e-01 100.0% 86.1%
3kkbA00 1.20.120.880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain 0.67 58.0 4.89e-01 100.0% 60.3%
2g47A04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 54.0 3.74e-01 88.7% 55.4%
3eslA01 1.20.58.2070 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 54.0 5.31e-01 94.4% 85.3%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.66 50.0 4.74e-01 83.1% 68.2%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.64 56.0 5.23e-01 100.0% 96.6%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.64 52.0 5.20e-01 94.4% 97.3%
2l8kA00 3.30.1330.220 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha 0.64 50.0 4.19e-01 87.3% 49.6%
1aj3A00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 55.0 5.01e-01 100.0% 99.0%
2ig3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 55.0 4.60e-01 100.0% 92.1%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 54.0 5.35e-01 98.6% 94.7%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.61 52.0 4.50e-01 100.0% 81.7%
3ce9A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.59 48.0 3.62e-01 94.4% 87.6%
1ic8A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 48.0 4.77e-01 93.0% 90.5%
3k3uA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 47.0 3.97e-01 95.8% 97.1%
1bccA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 50.0 3.63e-01 97.2% 77.9%
1fafA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.56 45.0 4.39e-01 98.6% 82.3%
7qocA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 43.0 3.28e-01 93.0% 81.8%
8einA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 43.0 2.92e-01 95.8% 44.4%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3596608 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.70 62.0 5.89e-01 100.0% 88.2%
3742281 1009.1.1.1 ↗ alpha duplicates or obligate multimers › Taz1 dimerization domain › Taz1 dimerization domain › Taz1 dimerization domain › PF31211 0.68 60.0 5.62e-01 100.0% 81.1%
3573559 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.67 59.0 5.02e-01 100.0% 83.3%
3598577 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.67 58.0 5.60e-01 100.0% 97.5%
3740089 1134.1.1.7 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 0.67 53.0 5.55e-01 100.0% 95.4%
4047303 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.66 59.0 5.20e-01 100.0% 85.7%
None — 0.66 58.0 5.51e-01 100.0% 97.6%
3712373 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.65 54.0 5.25e-01 91.5% 82.5%
4944333 633.10.1.0 ↗ alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.65 56.0 4.76e-01 100.0% 88.0%
3584478 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.65 57.0 5.32e-01 100.0% 84.4%
3341807 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.64 57.0 4.93e-01 100.0% 74.5%
3333216 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.64 56.0 5.10e-01 98.6% 85.3%
4029927 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.63 57.0 5.06e-01 100.0% 98.0%
3328228 601.33.1.7 ↗ alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › Exo70_N 0.63 55.0 5.20e-01 98.6% 83.5%
3498448 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.63 51.0 5.02e-01 95.8% 92.5%
5078180 2498.1.1.6 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 0.63 48.0 2.94e-01 84.5% 47.7%
4093066 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.62 55.0 5.28e-01 100.0% 92.5%
4180990 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.61 47.0 4.57e-01 90.1% 75.0%
3334463 633.1.1.1 ↗ alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain 0.61 55.0 4.45e-01 100.0% 69.6%
3525986 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 56.0 4.77e-01 100.0% 97.3%
3901917 1134.1.1.7 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 0.61 52.0 5.28e-01 100.0% 95.7%
3310989 109.4.1.359 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C 0.60 51.0 3.60e-01 100.0% 39.2%
3879443 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.60 49.0 4.73e-01 98.6% 78.8%
3592737 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.60 45.0 4.66e-01 91.5% 92.3%
3943307 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 50.0 4.73e-01 94.4% 82.4%
1933314 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.59 49.0 4.80e-01 100.0% 86.8%
4341411 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 46.0 4.62e-01 93.0% 86.5%
3200033 109.4.1.2268 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28359 0.58 45.0 3.15e-01 88.7% 25.5%
3400447 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 49.0 3.58e-01 100.0% 55.2%
3353941 1134.1.1.7 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 0.57 42.0 4.35e-01 90.1% 87.7%
3637885 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 48.0 3.68e-01 95.8% 94.1%
3405299 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 48.0 3.48e-01 100.0% 55.1%
3832084 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.55 40.0 3.95e-01 81.7% 72.0%
3448849 605.8.1.5 ↗ alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Med26 0.54 41.0 4.31e-01 85.9% 92.3%
4457620 192.27.1.0 ↗ alpha bundles › Long alpha-hairpin › Helical hairpin in putative tRNA methyltransferase › Helical hairpin in putative tRNA methyltransferase 0.53 38.0 4.13e-01 90.1% 100.0%
3962057 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 43.0 4.26e-01 100.0% 96.2%
2722164 4275.1.1.6 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube 0.51 42.0 3.19e-01 95.8% 83.6%
D2 medium residues 226-301
PDB