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protein_ORF113
Euk-VirCyprinid_herpesvirus_2
protein_ORF113__YP_007003931__Cyprinid_herpesvirus_2__317878
Identity
- Accession:
- YP_007003931 ↗
- Protein ID:
- protein_ORF113
- Kingdom:
- euk
Quality
51.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_2
TaxID: 317878
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-127
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.63 | 37.0 | 3.88e-01 | 78.8% | 63.0% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 32.0 | 3.32e-01 | 72.7% | 54.7% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.56 | 32.0 | 3.03e-01 | 73.7% | 47.4% |
| 2g8sB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 48.0 | 3.31e-01 | 98.0% | 59.9% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 35.0 | 3.32e-01 | 93.9% | 55.2% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 39.0 | 3.14e-01 | 76.8% | 91.5% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 35.0 | 3.94e-01 | 87.9% | 88.0% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 37.0 | 3.39e-01 | 100.0% | 56.6% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 33.0 | 2.97e-01 | 93.9% | 45.8% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 39.0 | 3.56e-01 | 80.8% | 97.7% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 32.0 | 3.91e-01 | 94.9% | 96.9% |
| 3blcA00 | 2.70.98.90 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 45.0 | 3.26e-01 | 98.0% | 87.9% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.50 | 40.0 | 3.23e-01 | 84.8% | 63.2% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 40.0 | 3.29e-01 | 85.9% | 85.0% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.50 | 31.0 | 3.38e-01 | 92.9% | 75.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3890539 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.68 | 39.0 | 4.93e-01 | 77.8% | 95.0% |
| 3697694 | 4.1.1.288 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6540 | 0.67 | 58.0 | 5.47e-01 | 94.9% | 90.7% |
| 3231932 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 46.0 | 4.00e-01 | 93.9% | 49.0% |
| 3574559 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.56 | 48.0 | 4.33e-01 | 90.9% | 76.2% |
| 3408795 | 12.1.1.60 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Chitin_bind_4 | 0.56 | 34.0 | 4.18e-01 | 77.8% | 100.0% |
| 3851160 | 5.1.5.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Frtz | 0.55 | 49.0 | 3.03e-01 | 97.0% | 31.4% |
| 3763123 | 5.1.4.371 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Frtz | 0.55 | 49.0 | 3.20e-01 | 97.0% | 42.6% |
| 3414586 | 11.1.1.824 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chitin_bind_4 | 0.55 | 34.0 | 3.52e-01 | 78.8% | 65.6% |
| 3997515 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.55 | 44.0 | 3.23e-01 | 94.9% | 32.9% |
| 3355345 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 30.0 | 3.52e-01 | 82.8% | 75.7% |
| 3402405 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.55 | 34.0 | 4.02e-01 | 78.8% | 96.8% |
| 4030163 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 41.0 | 4.05e-01 | 85.9% | 76.2% |
| 146266 | 295.1.1.8 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 | 0.53 | 35.0 | 3.78e-01 | 86.9% | 78.6% |
| 3915503 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 48.0 | 3.33e-01 | 100.0% | 53.3% |
| 3890275 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 37.0 | 3.89e-01 | 93.9% | 83.0% |
| 4940077 | 5.1.5.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 | 0.52 | 45.0 | 3.04e-01 | 96.0% | 71.6% |
| 3272078 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 46.0 | 3.35e-01 | 99.0% | 48.2% |
| None | — | 0.52 | 35.0 | 2.33e-01 | 97.0% | 15.9% | |
| 3441598 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 45.0 | 3.18e-01 | 96.0% | 55.7% |
| 3937269 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.51 | 35.0 | 2.89e-01 | 98.0% | 37.8% |
| 3391303 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 2.92e-01 | 91.9% | 28.5% |
| 3698492 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 43.0 | 4.01e-01 | 93.9% | 81.6% |
| 3939070 | 11.1.1.1173 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7757 | 0.51 | 42.0 | 3.94e-01 | 90.9% | 83.2% |
| 4031480 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 38.0 | 3.95e-01 | 99.0% | 85.6% |
| 840 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.51 | 45.0 | 3.64e-01 | 96.0% | 82.3% |
| 4574150 | 12.6.1.9 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › DUF2152 | 0.50 | 44.0 | 3.81e-01 | 97.0% | 89.0% |
| 3717097 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 46.0 | 2.88e-01 | 100.0% | 36.5% |
| 3819740 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.50 | 32.0 | 3.30e-01 | 88.9% | 68.9% |
| 3650904 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 35.0 | 3.57e-01 | 93.9% | 73.7% |