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protein_ORF136A

Euk-Vir

Cyprinid_herpesvirus_1

protein_ORF136A__YP_007003792__Cyprinid_herpesvirus_1__317858

Identity

Accession:
YP_007003792 ↗
Protein ID:
protein_ORF136A
Kingdom:
euk

Quality

83.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 38-91
PDB
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mxwS00 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.97 92.0 7.91e-01 100.0% 69.6%
3me4B01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.97 89.0 7.57e-01 100.0% 65.0%
2uwiA01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.97 92.0 7.71e-01 100.0% 66.3%
6faxR01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.96 85.0 8.82e-01 96.3% 100.0%
4rsuE01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.93 83.0 8.07e-01 100.0% 88.1%
3mhdD01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.91 85.0 7.13e-01 100.0% 68.2%
3u3pA01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.90 84.0 7.12e-01 100.0% 69.9%
1extA01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.90 84.0 7.07e-01 100.0% 65.9%
1d4vA03 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.81 55.0 5.92e-01 96.3% 82.6%
4kgqD02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.79 61.0 5.39e-01 85.2% 70.0%
1sg1X02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.79 59.0 5.24e-01 81.5% 72.2%
4yn0A02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.78 59.0 5.14e-01 83.3% 67.5%
1sg1X01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.71 62.0 5.48e-01 100.0% 66.7%
2heyT02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.67 56.0 4.92e-01 98.1% 62.8%
5wjfA02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.60 48.0 4.34e-01 98.1% 63.5%
3mhdD02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.59 44.0 4.72e-01 83.3% 100.0%
2jeuA02 2.170.200.10 Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain 0.53 39.0 3.29e-01 83.3% 77.2%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 35.0 2.33e-01 77.8% 79.1%
3bbaA00 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.50 41.0 2.82e-01 100.0% 50.8%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3876372 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.99 95.0 8.05e-01 100.0% 67.5%
3558594 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.99 95.0 8.77e-01 100.0% 83.1%
3887144 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.99 95.0 7.67e-01 100.0% 60.0%
4342996 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.98 91.0 7.71e-01 100.0% 65.0%
3921747 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.98 91.0 7.69e-01 100.0% 65.0%
3539066 389.1.3.8 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › RANK_CRD_2 0.98 89.0 7.80e-01 100.0% 69.3%
3911223 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.97 93.0 7.72e-01 100.0% 69.4%
411888 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.96 83.0 8.19e-01 94.4% 87.5%
3898988 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.96 88.0 7.68e-01 100.0% 69.3%
1572602 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.95 83.0 8.30e-01 92.6% 90.9%
1759571 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.93 88.0 8.61e-01 100.0% 96.5%
1672304 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.93 86.0 8.37e-01 100.0% 93.2%
3556262 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.93 87.0 7.30e-01 100.0% 68.2%
3507723 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.93 75.0 6.40e-01 85.2% 71.2%
1639607 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.92 85.0 8.33e-01 98.1% 100.0%
3871490 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.92 83.0 7.11e-01 100.0% 65.0%
3553054 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.91 85.0 7.30e-01 100.0% 70.0%
3774474 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.91 85.0 7.40e-01 100.0% 70.7%
1184747 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.91 84.0 7.16e-01 100.0% 70.7%
1394117 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.90 83.0 7.90e-01 98.1% 90.2%
3884016 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.90 83.0 8.00e-01 100.0% 96.7%
3880887 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.90 85.0 7.24e-01 100.0% 67.5%
3886488 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.90 84.0 7.04e-01 100.0% 63.5%
3847264 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.89 79.0 6.40e-01 100.0% 54.7%
3526975 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.88 82.0 5.52e-01 100.0% 30.9%
3555201 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.88 64.0 6.14e-01 77.8% 68.3%
3482382 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.87 78.0 6.66e-01 100.0% 69.4%
8527 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.86 73.0 7.33e-01 98.1% 92.6%
3893236 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.84 65.0 5.80e-01 83.3% 77.3%
3869177 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.84 74.0 6.57e-01 98.1% 69.3%
3856953 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.82 76.0 7.55e-01 100.0% 98.2%
3883090 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.81 72.0 6.30e-01 100.0% 66.3%
1184772 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.80 62.0 5.43e-01 85.2% 69.1%
3910723 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.79 63.0 4.97e-01 85.2% 57.1%
3540238 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.79 61.0 4.47e-01 85.2% 38.6%
3516979 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.79 69.0 6.10e-01 100.0% 92.5%
2492302 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.79 65.0 6.56e-01 100.0% 90.7%
1884975 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.79 59.0 5.27e-01 81.5% 70.1%
4221424 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.78 60.0 5.34e-01 85.2% 73.8%
4377309 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.77 58.0 5.17e-01 83.3% 73.8%
8523 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.76 54.0 5.94e-01 75.9% 100.0%
1572587 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.76 57.0 4.88e-01 81.5% 68.5%
1758433 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.75 56.0 5.61e-01 81.5% 98.2%
3887726 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.75 67.0 5.88e-01 100.0% 68.8%
1184748 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.75 57.0 5.06e-01 85.2% 69.5%
3882488 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.75 58.0 5.32e-01 96.3% 64.7%
1853180 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.74 54.0 5.86e-01 77.8% 100.0%
3876373 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.73 54.0 5.13e-01 79.6% 69.8%
3920102 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.72 59.0 5.37e-01 92.6% 74.7%
8521 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.71 60.0 5.97e-01 96.3% 96.4%
3562936 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.70 59.0 5.14e-01 92.6% 68.8%
3894281 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.70 58.0 5.07e-01 94.4% 67.1%
2909867 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.70 51.0 4.68e-01 92.6% 60.9%
3900125 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.69 59.0 5.13e-01 92.6% 70.0%
3537808 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.68 46.0 5.05e-01 72.2% 95.0%
3708759 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.68 46.0 4.65e-01 77.8% 70.9%
3904702 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.66 57.0 4.75e-01 94.4% 61.1%
3391102 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.61 42.0 4.73e-01 100.0% 97.5%
2099165 10.2.1.22 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 0.53 37.0 2.34e-01 77.8% 69.3%
4301885 377.4.1.2 few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › RRG8 0.52 37.0 3.02e-01 75.9% 60.6%
4379431 376.1.6.12 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › Tmemb_55A 0.51 36.0 3.28e-01 98.1% 53.3%
3859918 375.1.1.202 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A 0.51 36.0 3.29e-01 98.1% 53.3%
3617897 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.50 42.0 3.85e-01 96.3% 81.3%
3199487 377.4.1.0 few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like 0.50 27.0 2.56e-01 90.7% 30.8%
4174957 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.50 41.0 2.91e-01 96.3% 65.6%
D2 medium residues 100-134
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wvtA02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.83 77.0 6.94e-01 100.0% 78.3%
5cirE02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.74 56.0 5.51e-01 97.1% 80.0%
3fbyA01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.65 48.0 4.43e-01 100.0% 59.6%
2askA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.57 45.0 3.45e-01 100.0% 93.1%
2jyeA01 2.10.25.160 Mainly Beta › Ribbon › Laminin › Granulin 0.55 41.0 3.52e-01 100.0% 49.2%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.50 40.0 2.87e-01 100.0% 89.8%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3880888 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.92 81.0 5.92e-01 100.0% 38.9%
3892310 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.82 73.0 6.96e-01 97.1% 85.0%
8517 389.1.3.1 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.78 61.0 5.96e-01 97.1% 80.0%
3558596 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.77 66.0 6.16e-01 100.0% 77.8%
3872619 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.77 66.0 6.12e-01 100.0% 77.8%
4860549 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.75 61.0 5.77e-01 100.0% 77.8%
1497631 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.73 58.0 5.49e-01 100.0% 76.6%
3924924 387.1.7.0 few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold 0.67 47.0 4.75e-01 100.0% 77.1%
3268082 387.1.3.0 few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like 0.61 47.0 4.77e-01 85.7% 91.4%
4987158 60.1.2.1 beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku 0.52 38.0 2.39e-01 88.6% 57.1%