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protein_ORF142
Euk-VirCyprinid_herpesvirus_1
protein_ORF142__YP_007003795__Cyprinid_herpesvirus_1__317858
Identity
- Accession:
- YP_007003795 ↗
- Protein ID:
- protein_ORF142
- Kingdom:
- euk
Quality
71.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_1
TaxID: 317858
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-87
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.80 | 68.0 | 6.68e-01 | 100.0% | 86.8% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 61.0 | 6.38e-01 | 90.5% | 94.7% |
| 7myqB02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.72 | 38.0 | 4.07e-01 | 88.9% | 60.0% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.72 | 63.0 | 5.52e-01 | 98.4% | 64.6% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 53.0 | 5.21e-01 | 87.3% | 76.1% |
| 2yfqB01 | 1.10.8.1210 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 36.0 | 3.93e-01 | 81.0% | 59.6% |
| 7mqvC02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.68 | 44.0 | 3.67e-01 | 74.6% | 40.0% |
| 6al9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.66 | 51.0 | 4.58e-01 | 90.5% | 59.3% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.66 | 50.0 | 4.78e-01 | 90.5% | 71.6% |
| 2oyoA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.65 | 48.0 | 3.81e-01 | 77.8% | 78.4% |
| 2uuzB00 | 1.10.10.2020 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Host-nuclease inhibitor protein Gam | 0.65 | 55.0 | 4.94e-01 | 92.1% | 78.8% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 48.0 | 3.87e-01 | 82.5% | 43.2% |
| 2az0B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 56.0 | 5.36e-01 | 100.0% | 87.3% |
| 2btoA03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 47.0 | 5.04e-01 | 85.7% | 96.3% |
| 4ielA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 45.0 | 3.76e-01 | 82.5% | 58.6% |
| 2lqlA02 | 1.10.287.2900 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 37.0 | 4.09e-01 | 76.2% | 97.7% |
| 5dkoA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.56 | 46.0 | 3.49e-01 | 95.2% | 94.6% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 43.0 | 4.10e-01 | 96.8% | 97.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3630501 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.76 | 66.0 | 4.13e-01 | 100.0% | 18.0% |
| 3725376 | 192.1.1.15 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF6604 | 0.76 | 55.0 | 5.01e-01 | 76.2% | 58.7% |
| 3298752 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.73 | 56.0 | 4.60e-01 | 100.0% | 46.1% |
| 3237525 | 101.1.1.290 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PBC | 0.72 | 62.0 | 5.04e-01 | 100.0% | 51.2% |
| 5026085 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.69 | 61.0 | 5.11e-01 | 100.0% | 60.2% |
| 3719486 | 2006.1.1.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.68 | 59.0 | 3.99e-01 | 100.0% | 25.9% |
| 4265467 | 2486.1.1.6 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ACCA | 0.68 | 52.0 | 3.23e-01 | 87.3% | 15.5% |
| 4147445 | 304.160.1.1 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF | 0.68 | 60.0 | 4.57e-01 | 98.4% | 44.1% |
| 3412019 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.67 | 58.0 | 5.12e-01 | 95.2% | 87.8% |
| 4571283 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.66 | 57.0 | 5.72e-01 | 100.0% | 95.4% |
| 3803918 | 192.29.1.28 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PIGO_PIGG | 0.59 | 54.0 | 3.12e-01 | 100.0% | 99.6% |
| 3618704 | 3959.1.1.1 ↗ | alpha duplicates or obligate multimers › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain › Hikeshi-like_C | 0.54 | 44.0 | 4.42e-01 | 98.4% | 93.8% |