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protein_ORF57
Euk-VirCyprinid_herpesvirus_1
protein_ORF57__YP_007003723__Cyprinid_herpesvirus_1__317858
Identity
- Accession:
- YP_007003723 ↗
- Protein ID:
- protein_ORF57
- Kingdom:
- euk
Quality
60.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_1
TaxID: 317858
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-73_92-177
Domain cluster:
rep: unnamed_protein_product__YP_001096092__Cyprinid_herpesvirus_3__180230__D32-109_129-192
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18907.6 best | DUF5662 | 44.0 | 2.60e-11 | 66.4% | 44.1% |
D2
medium
residues 74-91_178-270
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.71 | 30.0 | 3.44e-01 | 98.2% | 51.8% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.66 | 31.0 | 3.59e-01 | 100.0% | 60.5% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 31.0 | 3.44e-01 | 100.0% | 54.5% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.66 | 46.0 | 4.93e-01 | 100.0% | 83.5% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.59 | 43.0 | 4.75e-01 | 92.8% | 95.6% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.57 | 38.0 | 4.09e-01 | 74.8% | 78.1% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 36.0 | 4.07e-01 | 73.0% | 85.4% |
| 1kn1B00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.57 | 41.0 | 3.63e-01 | 74.8% | 64.0% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 41.0 | 4.20e-01 | 81.1% | 80.2% |
| 3dd7C00 | 1.20.120.1870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain | 0.56 | 38.0 | 3.76e-01 | 70.3% | 72.1% |
| 1bvp101 | 1.10.250.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 1 › Bluetongue Virus 10, subunit 1, domain 1 | 0.55 | 36.0 | 3.56e-01 | 95.5% | 60.8% |
| 2iw5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 4.45e-01 | 84.7% | 89.0% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.55 | 39.0 | 4.01e-01 | 88.3% | 76.4% |
| 3mpxA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.54 | 40.0 | 3.26e-01 | 75.7% | 96.1% |
| 1ad6A00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 41.0 | 3.50e-01 | 80.2% | 73.5% |
| 3on2A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 37.0 | 3.18e-01 | 71.2% | 65.3% |
| 1jkwA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 37.0 | 3.83e-01 | 81.1% | 78.2% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.52 | 38.0 | 3.94e-01 | 89.2% | 81.1% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 38.0 | 3.84e-01 | 83.8% | 78.6% |
| 1vinA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 41.0 | 3.85e-01 | 91.0% | 69.8% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 39.0 | 3.67e-01 | 81.1% | 81.3% |
| 2b9rA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 41.0 | 3.76e-01 | 85.6% | 74.3% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 36.0 | 3.26e-01 | 74.8% | 74.2% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5045625 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.63 | 56.0 | 3.79e-01 | 100.0% | 50.8% |
| 3814488 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 48.0 | 4.84e-01 | 83.8% | 83.6% |
| 3403967 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.59 | 42.0 | 3.62e-01 | 74.8% | 66.5% |
| 3503580 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.58 | 48.0 | 4.75e-01 | 87.4% | 85.2% |
| 3461725 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.58 | 48.0 | 4.72e-01 | 90.1% | 84.2% |
| 4016535 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 41.0 | 4.35e-01 | 81.1% | 83.0% |
| 3708815 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 43.0 | 4.35e-01 | 93.7% | 80.0% |
| 3345138 | 101.1.10.14 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C_2 | 0.57 | 43.0 | 4.11e-01 | 80.2% | 67.7% |
| 3358332 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.56 | 47.0 | 4.51e-01 | 90.1% | 80.0% |
| 4952942 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 39.0 | 4.25e-01 | 77.5% | 90.0% |
| 3739600 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.56 | 49.0 | 4.07e-01 | 100.0% | 81.5% |
| 4854386 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.55 | 34.0 | 3.53e-01 | 100.0% | 65.7% |
| 3984343 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 48.0 | 4.01e-01 | 97.3% | 89.5% |
| 3512795 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.55 | 49.0 | 4.37e-01 | 100.0% | 88.7% |
| 3935496 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.55 | 49.0 | 4.20e-01 | 100.0% | 80.0% |
| 2756411 | 101.1.1.28 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SWIRM | 0.55 | 44.0 | 4.53e-01 | 86.5% | 92.3% |
| 3500366 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.54 | 49.0 | 4.13e-01 | 100.0% | 92.4% |
| 3601146 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 49.0 | 3.83e-01 | 100.0% | 55.7% |
| 3492714 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 40.0 | 3.47e-01 | 79.3% | 75.6% |
| 3577478 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.54 | 48.0 | 4.08e-01 | 100.0% | 89.7% |
| 3539629 | 101.1.10.12 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Spy1 | 0.54 | 44.0 | 4.17e-01 | 100.0% | 73.3% |
| 3718570 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.54 | 47.0 | 4.51e-01 | 96.4% | 84.8% |
| 3581101 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.54 | 40.0 | 3.50e-01 | 79.3% | 78.8% |
| 1276625 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.53 | 47.0 | 3.55e-01 | 97.3% | 44.4% |
| 3241631 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.53 | 44.0 | 3.97e-01 | 90.1% | 71.0% |
| 3285405 | 532.1.1.1 ↗ | alpha arrays › Type III secretion system domain-like › Antibiotic binding domain of TipA-like multidrug resistance regulators › Antibiotic binding domain of TipA-like multidrug resistance regulators › TipAS | 0.53 | 38.0 | 3.71e-01 | 73.9% | 80.0% |
| 3990437 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.53 | 47.0 | 4.07e-01 | 100.0% | 96.6% |
| 4984231 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.53 | 45.0 | 3.53e-01 | 94.6% | 70.6% |
| 5043976 | 3678.1.1.0 ↗ | alpha arrays › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain | 0.53 | 40.0 | 3.97e-01 | 93.7% | 76.7% |
| 4948103 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.52 | 46.0 | 3.64e-01 | 95.5% | 78.2% |
| 4926847 | 3962.1.1.0 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit | 0.52 | 44.0 | 3.96e-01 | 93.7% | 91.3% |
| 4970804 | 613.1.1.0 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | 0.52 | 44.0 | 3.40e-01 | 91.9% | 74.0% |
| 3595619 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.52 | 40.0 | 3.95e-01 | 86.5% | 75.8% |
| 4013673 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.52 | 46.0 | 3.52e-01 | 99.1% | 42.6% |
| 4240426 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.52 | 45.0 | 3.86e-01 | 100.0% | 76.2% |
| 3392742 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.51 | 41.0 | 3.91e-01 | 87.4% | 82.2% |
| 5000486 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.51 | 44.0 | 3.81e-01 | 94.6% | 91.8% |
| 3385808 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.51 | 38.0 | 3.84e-01 | 97.3% | 80.0% |
| 3717024 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.51 | 45.0 | 3.97e-01 | 99.1% | 96.9% |
| 3853197 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.50 | 43.0 | 3.73e-01 | 100.0% | 59.0% |
| 3776643 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.50 | 38.0 | 3.84e-01 | 91.9% | 80.9% |
| 3513473 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.50 | 41.0 | 3.76e-01 | 100.0% | 66.0% |