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protein_ORF60

Euk-Vir

Anguillid_herpesvirus_1

protein_ORF60__YP_003358199__Anguillid_herpesvirus_1__150286

Identity

Accession:
YP_003358199 ↗
Protein ID:
protein_ORF60
Kingdom:
euk

Quality

62.9 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Alloherpesviridae› Cyvirus› Anguillid_herpesvirus_1

TaxID: 150286

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-16_36-74
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4uelA02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 76.0 6.91e-01 100.0% 75.0%
1hqoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.83 70.0 5.22e-01 92.7% 44.3%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.83 75.0 6.50e-01 100.0% 78.0%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.83 60.0 5.09e-01 78.2% 60.4%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.82 73.0 6.24e-01 100.0% 68.2%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 72.0 6.42e-01 98.2% 72.4%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.81 74.0 5.65e-01 100.0% 76.3%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.81 70.0 4.65e-01 100.0% 33.0%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 72.0 5.81e-01 100.0% 55.8%
3ehfB01 6.10.250.2870 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.79 67.0 5.44e-01 94.5% 70.2%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.78 65.0 6.32e-01 92.7% 88.7%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.78 68.0 6.04e-01 98.2% 71.8%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.77 60.0 5.75e-01 98.2% 72.3%
3craA02 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.77 58.0 4.34e-01 80.0% 35.9%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.76 61.0 5.86e-01 89.1% 81.0%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.75 63.0 3.70e-01 89.1% 23.5%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 64.0 5.97e-01 100.0% 78.9%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.72 63.0 5.56e-01 100.0% 71.6%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.70 58.0 5.11e-01 100.0% 66.7%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 51.0 4.65e-01 83.6% 57.7%
2ckoA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.66 57.0 3.63e-01 98.2% 53.0%
2pusA04 6.10.140.300 Special › Helix non-globular › Helix Hairpins › 0.62 41.0 3.48e-01 70.9% 42.6%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 55.0 4.55e-01 100.0% 59.6%
3keaA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.51 36.0 2.36e-01 78.2% 24.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3766182 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.95 65.0 4.56e-01 70.9% 26.9%
4617701 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.88 80.0 6.95e-01 98.2% 68.8%
3880439 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.88 80.0 4.56e-01 100.0% 12.6%
5039854 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.85 75.0 6.73e-01 96.4% 74.7%
149872 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.84 68.0 6.04e-01 89.1% 79.7%
5055630 150.1.1.3 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.78 64.0 4.60e-01 90.9% 87.7%
3843224 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.75 65.0 4.16e-01 94.5% 22.1%
3535346 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.73 63.0 3.73e-01 100.0% 13.0%
3348367 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.70 62.0 3.66e-01 98.2% 28.4%
3222895 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.67 58.0 5.18e-01 100.0% 71.2%