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protein_ORF73

Euk-Vir

Cyprinid_herpesvirus_2

protein_ORF73__YP_007003892__Cyprinid_herpesvirus_2__317878

Identity

Accession:
YP_007003892 ↗
Protein ID:
protein_ORF73
Kingdom:
euk

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Alloherpesviridae› Cyvirus› Cyprinid_herpesvirus_2

TaxID: 317878

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-143
PDB
Domain cluster: rep: ORF36__NP_041127__Ictalurid_herpesvirus_1__10401__D11-105
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.68 29.0 3.62e-01 100.0% 63.6%
2z9eA02 3.30.70.2590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 43.0 4.27e-01 73.3% 98.2%
2ltsA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 36.0 3.90e-01 100.0% 69.8%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 29.0 3.36e-01 75.2% 63.5%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.57 42.0 4.38e-01 92.4% 82.7%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 32.0 3.32e-01 88.6% 59.4%
1vgyA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 41.0 3.13e-01 83.8% 80.5%
6bs6B01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 43.0 4.54e-01 92.4% 100.0%
3wwxA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 40.0 2.88e-01 83.8% 87.9%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.51 38.0 3.45e-01 80.0% 57.9%
4q05A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 36.0 2.53e-01 72.4% 30.9%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.51 40.0 4.06e-01 84.8% 93.4%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939124 873.1.1.19 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › MetOD1 0.68 52.0 4.60e-01 81.0% 76.0%
4983783 873.1.1.20 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 0.67 51.0 4.47e-01 81.0% 78.8%
3973641 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.66 55.0 4.47e-01 90.5% 74.9%
3969599 873.1.1.7 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd 0.65 54.0 4.39e-01 90.5% 73.5%
5026193 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.65 49.0 4.51e-01 79.0% 83.7%
3881061 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 30.0 3.63e-01 70.5% 66.2%
3968730 873.1.1.7 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd 0.65 53.0 4.33e-01 88.6% 73.8%
4929462 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.64 52.0 5.07e-01 88.6% 95.7%
5023930 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 37.0 4.00e-01 100.0% 70.6%
3952545 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.62 38.0 4.26e-01 95.2% 81.0%
1693530 225.3.1.1 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Virion egress protein UL31 homolog › Virion egress protein UL31 homolog › Herpes_UL31 0.62 55.0 4.34e-01 100.0% 66.7%
4927889 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.62 30.0 3.57e-01 71.4% 66.7%
4985279 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.59 31.0 3.51e-01 72.4% 66.3%
3993443 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 31.0 3.57e-01 96.2% 70.7%
5017105 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.58 51.0 4.51e-01 100.0% 81.9%
5024203 330.10.1.0 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.58 33.0 3.57e-01 97.1% 64.4%
4026305 1.1.5.36 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like 0.58 39.0 3.29e-01 70.5% 97.9%
3952804 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 31.0 4.05e-01 99.0% 100.0%
3784907 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.57 30.0 3.25e-01 100.0% 60.0%
4998404 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 31.0 4.02e-01 93.3% 95.0%
3652916 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.56 37.0 3.05e-01 89.5% 36.8%
3501861 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 34.0 3.44e-01 100.0% 60.0%
4983622 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.54 47.0 4.13e-01 100.0% 86.7%
3971678 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.60e-01 70.5% 67.5%
4131962 7506.1.1.1 ↗ a/b three-layered sandwiches › N-terminal domain of GerK3 germinant receptor › N-terminal domain of GerK3 germinant receptor › N-terminal domain of GerK3 germinant receptor › GerA 0.53 39.0 3.74e-01 77.1% 93.3%
3385545 319.3.1.0 ↗ beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ 0.51 37.0 3.83e-01 87.6% 79.0%
4993093 316.1.1.18 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.51 42.0 3.02e-01 90.5% 40.7%