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protein_RH
Euk-VirLizard_adenovirus_2
protein_RH__YP_009051676__Lizard_adenovirus_2__874272
Identity
- Accession:
- YP_009051676 ↗
- Protein ID:
- protein_RH
- Kingdom:
- euk
Quality
60.5
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Lizard_adenovirus_2
TaxID: 874272
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-89
D2
medium
residues 97-162
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.75 | 50.0 | 5.68e-01 | 72.7% | 97.8% |
| 6m90A01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.72 | 63.0 | 5.59e-01 | 100.0% | 72.7% |
| 2mw2A00 | 1.20.1280.40 | Mainly Alpha › Up-down Bundle › Monooxygenase › HHA | 0.58 | 45.0 | 4.53e-01 | 87.9% | 97.0% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.57 | 45.0 | 3.38e-01 | 87.9% | 98.9% |
| 2dsjA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.57 | 41.0 | 4.11e-01 | 77.3% | 95.5% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 42.0 | 3.47e-01 | 83.3% | 60.0% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 44.0 | 3.46e-01 | 93.9% | 43.6% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.54 | 38.0 | 3.43e-01 | 77.3% | 85.3% |
| 3h5qA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.54 | 39.0 | 3.90e-01 | 80.3% | 91.4% |
| 1q2lA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 41.0 | 2.93e-01 | 90.9% | 63.6% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 43.0 | 3.43e-01 | 100.0% | 92.2% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3802856 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.89 | 65.0 | 7.14e-01 | 80.3% | 92.7% |
| 3454872 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.87 | 61.0 | 6.90e-01 | 74.2% | 100.0% |
| 3245054 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 64.0 | 6.92e-01 | 90.9% | 94.5% |
| 3441396 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.85 | 60.0 | 6.76e-01 | 87.9% | 96.0% |
| 3834246 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.83 | 66.0 | 7.12e-01 | 84.8% | 100.0% |
| 3448854 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 60.0 | 6.68e-01 | 75.8% | 100.0% |
| 3806575 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.83 | 63.0 | 6.84e-01 | 81.8% | 100.0% |
| 3209791 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 63.0 | 6.35e-01 | 92.4% | 81.5% |
| 3806680 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.82 | 59.0 | 6.68e-01 | 87.9% | 100.0% |
| 3826054 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.82 | 58.0 | 6.31e-01 | 74.2% | 90.9% |
| 4021336 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.81 | 64.0 | 6.74e-01 | 84.8% | 96.7% |
| 3254943 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 58.0 | 6.48e-01 | 78.8% | 100.0% |
| 3375219 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.81 | 56.0 | 6.08e-01 | 72.7% | 87.3% |
| 3804777 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.81 | 59.0 | 6.32e-01 | 77.3% | 100.0% |
| 3466887 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.80 | 56.0 | 6.26e-01 | 72.7% | 96.0% |
| 3810025 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.80 | 60.0 | 5.90e-01 | 80.3% | 74.3% |
| 3313107 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 53.0 | 6.15e-01 | 72.7% | 100.0% |
| 3451260 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.79 | 62.0 | 6.46e-01 | 84.8% | 91.7% |
| 3344585 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.77 | 60.0 | 6.12e-01 | 84.8% | 98.5% |
| 3806093 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.76 | 53.0 | 5.85e-01 | 74.2% | 100.0% |
| 3250247 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 61.0 | 6.34e-01 | 93.9% | 95.0% |
| 3261282 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.75 | 57.0 | 6.14e-01 | 92.4% | 98.2% |
| 3352484 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.75 | 64.0 | 3.86e-01 | 90.9% | 25.9% |
| 3829887 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.75 | 54.0 | 5.80e-01 | 77.3% | 96.4% |
| 3176493 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.74 | 62.0 | 5.34e-01 | 92.4% | 82.9% |
| 3649929 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.74 | 58.0 | 5.32e-01 | 84.8% | 84.7% |
| 4500280 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.74 | 65.0 | 5.96e-01 | 98.5% | 85.9% |
| 3358453 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.73 | 62.0 | 6.11e-01 | 95.5% | 90.0% |
| 3426053 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.72 | 52.0 | 5.65e-01 | 78.8% | 92.7% |
| 3294473 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.72 | 51.0 | 5.61e-01 | 74.2% | 100.0% |
| 3259869 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.72 | 61.0 | 5.65e-01 | 93.9% | 87.1% |
| 3427473 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.72 | 52.0 | 5.58e-01 | 77.3% | 96.4% |
| 3818741 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.72 | 57.0 | 5.97e-01 | 86.4% | 95.0% |
| 4023099 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.71 | 63.0 | 5.22e-01 | 100.0% | 100.0% |
| 3194125 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.71 | 61.0 | 5.71e-01 | 95.5% | 95.0% |
| 4023603 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.71 | 62.0 | 6.12e-01 | 98.5% | 92.9% |
| 3902311 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.71 | 59.0 | 5.48e-01 | 95.5% | 96.5% |
| 3248494 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.69 | 56.0 | 5.67e-01 | 89.4% | 92.3% |
| 3742900 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.68 | 60.0 | 4.74e-01 | 98.5% | 87.4% |
| 3201568 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.67 | 55.0 | 5.49e-01 | 92.4% | 92.9% |
| 3456091 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.67 | 51.0 | 5.51e-01 | 89.4% | 100.0% |
| 3806475 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.66 | 58.0 | 5.56e-01 | 98.5% | 93.3% |
| 3456664 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.66 | 50.0 | 5.37e-01 | 90.9% | 100.0% |
| 3833473 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.63 | 53.0 | 5.03e-01 | 95.5% | 85.0% |
| 4012875 | 109.8.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Arp2/3 complex 16 KDa subunit ARPC5 › Arp2/3 complex 16 KDa subunit ARPC5 | 0.60 | 41.0 | 3.70e-01 | 74.2% | 58.0% |
| 3987417 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.55 | 39.0 | 2.62e-01 | 78.8% | 96.4% |
| 3614116 | 109.34.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › 26S proteasome subunit Rpn2 N-terminal domain › 26S proteasome subunit Rpn2 N-terminal domain › RPN2_N | 0.53 | 46.0 | 2.99e-01 | 100.0% | 29.4% |
D3
medium
residues 163-227
Domain cluster:
representative