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protein_TE3
Euk-VirTestudinid_alphaherpesvirus_3
protein_TE3__YP_009176858__Testudinid_alphaherpesvirus_3__2560801
Identity
- Accession:
- YP_009176858 ↗
- Protein ID:
- protein_TE3
- Kingdom:
- euk
Quality
45.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Scutavirus›
Testudinid_alphaherpesvirus_3
TaxID: 2560801
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-66_188-209
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z72A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.61 | 50.0 | 3.57e-01 | 92.5% | 89.4% |
| 3hn0A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 43.0 | 3.15e-01 | 73.1% | 82.4% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 40.0 | 3.23e-01 | 71.6% | 93.5% |
| 7dm9A01 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.52 | 45.0 | 3.43e-01 | 100.0% | 66.9% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.51 | 39.0 | 4.02e-01 | 97.0% | 87.1% |
| 3vnaA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 38.0 | 3.08e-01 | 83.6% | 72.3% |
| 2f5jB00 | 1.10.274.30 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › MRG domain | 0.51 | 42.0 | 3.31e-01 | 98.5% | 68.6% |
| 3eupB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 40.0 | 2.97e-01 | 92.5% | 56.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3676003 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.60 | 51.0 | 4.11e-01 | 98.5% | 86.4% |
| 3601786 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 37.0 | 3.69e-01 | 71.6% | 98.6% |
| 4936366 | 3997.1.1.1 ↗ | alpha arrays › Helical insertion domain in magnesium chelatase catalytic subunit › Helical insertion domain in magnesium chelatase catalytic subunit › Helical insertion domain in magnesium chelatase catalytic subunit › CobN-Mg_chel | 0.51 | 37.0 | 2.76e-01 | 85.1% | 26.7% |
| 4027852 | 3636.1.1.1 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain › HBB | 0.51 | 36.0 | 2.74e-01 | 74.6% | 74.1% |
| 4983596 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.51 | 36.0 | 3.73e-01 | 91.0% | 78.5% |
D2
medium
residues 210-291
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jfrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.68 | 55.0 | 3.90e-01 | 89.0% | 47.7% |
| 1gpeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 55.0 | 4.10e-01 | 93.9% | 87.7% |
| 1itzA03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 56.0 | 4.83e-01 | 96.3% | 70.9% |
| 1e3jA02 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.64 | 44.0 | 3.31e-01 | 72.0% | 85.4% |
| 2fx5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 51.0 | 3.62e-01 | 89.0% | 43.8% |
| 4rpcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 54.0 | 3.85e-01 | 96.3% | 40.8% |
| 4x00A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 56.0 | 3.88e-01 | 100.0% | 39.9% |
| 3qitB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 56.0 | 3.83e-01 | 100.0% | 37.5% |
| 1fj2A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 54.0 | 3.96e-01 | 100.0% | 58.1% |
| 3emxA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 52.0 | 4.60e-01 | 97.6% | 78.2% |
| 4hvtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 54.0 | 3.64e-01 | 100.0% | 38.6% |
| 3og9A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 53.0 | 3.97e-01 | 98.8% | 60.2% |
| 4h0cA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 52.0 | 3.92e-01 | 100.0% | 57.1% |
| 3qwbA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.59 | 40.0 | 3.18e-01 | 72.0% | 80.5% |
| 1bgwA02 | 3.40.50.670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 52.0 | 4.09e-01 | 98.8% | 72.5% |
| 2xdqA03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.58 | 43.0 | 3.79e-01 | 79.3% | 63.7% |
| 1dmgA00 | 3.40.1370.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L4; Chain: A; › Ribosomal protein L4/L1 | 0.56 | 40.0 | 3.20e-01 | 74.4% | 75.6% |
| 7wgrA03 | 3.40.50.11610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain | 0.55 | 47.0 | 4.11e-01 | 98.8% | 74.8% |
| 3c9hA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 47.0 | 3.71e-01 | 100.0% | 65.1% |
| 5tvwA01 | 3.40.50.11260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 4.03e-01 | 100.0% | 90.5% |
| 2v3jA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.50 | 40.0 | 3.11e-01 | 89.0% | 68.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3232688 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.74 | 62.0 | 4.33e-01 | 89.0% | 57.6% |
| 4981459 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.73 | 66.0 | 5.58e-01 | 100.0% | 76.3% |
| 3959449 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.70 | 57.0 | 4.57e-01 | 89.0% | 76.2% |
| 4888027 | 7579.1.1.98 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II, PETase | 0.67 | 55.0 | 3.93e-01 | 90.2% | 48.4% |
| 4020334 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.64 | 58.0 | 4.52e-01 | 100.0% | 72.4% |
| 3485118 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.63 | 57.0 | 4.57e-01 | 100.0% | 77.5% |
| 3601881 | 7579.1.1.23 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II | 0.63 | 56.0 | 3.62e-01 | 100.0% | 55.4% |
| 161301 | 7579.1.1.46 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Chlorophyllase2 | 0.63 | 51.0 | 3.62e-01 | 89.0% | 43.8% |
| 5053299 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.63 | 57.0 | 3.99e-01 | 100.0% | 38.8% |
| 3281019 | 7579.1.1.46 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Chlorophyllase2 | 0.62 | 55.0 | 3.77e-01 | 100.0% | 37.3% |
| 3231032 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.62 | 56.0 | 4.53e-01 | 98.8% | 84.7% |
| 4599192 | 7579.1.1.58 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF829 | 0.61 | 55.0 | 3.79e-01 | 100.0% | 48.2% |
| 5076183 | 7522.1.1.4 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II | 0.61 | 55.0 | 4.73e-01 | 100.0% | 68.5% |
| 3241501 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.61 | 54.0 | 3.78e-01 | 100.0% | 42.5% |
| 3435176 | 7579.1.1.107 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, Abhydrolase_2 | 0.61 | 53.0 | 3.87e-01 | 100.0% | 57.1% |
| 3838443 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.61 | 54.0 | 4.72e-01 | 100.0% | 75.2% |
| 4947932 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.61 | 53.0 | 4.76e-01 | 97.6% | 73.9% |
| 3939649 | 7579.1.1.70 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 | 0.61 | 54.0 | 3.72e-01 | 100.0% | 37.9% |
| 3246286 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.60 | 53.0 | 3.64e-01 | 100.0% | 41.6% |
| 5017203 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.59 | 53.0 | 4.74e-01 | 100.0% | 74.8% |
| 3265152 | 2010.1.1.2 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › Dak1 | 0.59 | 52.0 | 3.95e-01 | 100.0% | 61.5% |
| 4021758 | 2010.1.1.0 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain | 0.59 | 50.0 | 3.98e-01 | 100.0% | 58.4% |
| 4964843 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.58 | 40.0 | 3.28e-01 | 70.7% | 80.6% |
| 3268594 | 7559.1.1.1 ↗ | a/b three-layered sandwiches › Ribosomal protein L4 › Ribosomal protein L4 › Ribosomal protein L4 › Ribosomal_L4 | 0.55 | 39.0 | 2.94e-01 | 74.4% | 77.1% |
| 5053801 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.55 | 38.0 | 3.21e-01 | 72.0% | 72.4% |
| 5017188 | 7522.1.1.6 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PF30897 | 0.55 | 48.0 | 3.87e-01 | 100.0% | 54.5% |
| 4171946 | 7559.1.1.1 ↗ | a/b three-layered sandwiches › Ribosomal protein L4 › Ribosomal protein L4 › Ribosomal protein L4 › Ribosomal_L4 | 0.54 | 38.0 | 2.88e-01 | 74.4% | 79.0% |
| 3974059 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.53 | 36.0 | 3.36e-01 | 70.7% | 76.4% |
| 3233271 | 7568.1.1.2 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT | 0.51 | 37.0 | 3.49e-01 | 89.0% | 63.0% |