protein_UL105

Euk-Vir

Cynomolgus_macaque_cytomegalovirus_strain_Ottawa

protein_UL105__YP_004933882__Cynomolgus_macaque_cytomegalovirus_strain_Ottawa__944969

Identity

74.7 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Cynomolgus_macaque_cytomegalovirus_strain_Ottawa

TaxID: 944969

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 79-92_243-331_841-859

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	155.2	2.90e-45	74.6%	11.0%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fi8C00	2.60.40.550	Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin	0.54	19.0	2.31e-01	76.2%	42.3%
2b9dA01	3.30.160.330	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.54	18.0	3.06e-01	74.6%	89.7%
2bm0A03	3.30.70.870	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3	0.52	19.0	2.84e-01	92.6%	74.5%
2pe4A00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.51	45.0	3.19e-01	100.0%	55.9%
3fg9C01	3.40.50.620	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs	0.51	35.0	3.38e-01	99.2%	61.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3739576	327.11.2.27 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin	0.57	19.0	2.86e-01	79.5%	65.5%
3212817	145.1.1.1 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box	0.51	41.0	3.90e-01	100.0%	72.7%

D2 medium residues 93-242

PDB

Domain cluster: rep: helicase_subunit__YP_009179342__Elephant_endotheliotropic_herpesvirus_4__548914__D47-64_102-182_199-230

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	181.3	3.80e-53	100.0%	19.1%

D3 medium residues 459-524_670-783

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009010991__Chimpanzee_herpesvirus_strain_105640__332937__D496-582_686-776

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	130.2	1.00e-37	63.9%	14.0%
PF02689.21	Herpes_Helicase	83.7	1.20e-23	37.8%	8.0%

D4 medium residues 525-550_624-669

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009042021__Bovine_gammaherpesvirus_6__1504288__D477-585

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	33.9	1.30e-08	87.5%	5.8%