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protein_UL117

Euk-Vir

Human_betaherpesvirus_7

protein_UL117__YP_073821__Human_betaherpesvirus_7__10372

Identity

Accession:
YP_073821 ↗
Protein ID:
protein_UL117
Kingdom:
euk

Quality

62.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 138-197_232-310
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03361.21 best Herpes_IE2_3 68.5 7.10e-19 50.4% 37.0%
PF03361.21 Herpes_IE2_3 47.4 2.20e-12 46.8% 38.3%
D2 medium residues 198-226
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zvwA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.69 54.0 4.17e-01 89.7% 62.1%
4o5fA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 45.0 2.89e-01 86.2% 16.8%
4d6wB02 6.10.140.740 Special › Helix non-globular › Helix Hairpins › 0.61 47.0 3.39e-01 89.7% 44.6%
2cjjA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 45.0 3.61e-01 100.0% 58.7%
3plnA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 42.0 2.86e-01 100.0% 18.8%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 38.0 3.45e-01 100.0% 48.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973161 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.76 62.0 3.73e-01 100.0% 17.1%
5080717 187.1.1.1 alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 0.62 52.0 3.72e-01 100.0% 76.8%
3254786 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.58 49.0 3.93e-01 100.0% 61.7%
4969755 6128.1.1.0 0.57 50.0 4.20e-01 100.0% 54.5%
3231425 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.56 47.0 3.76e-01 96.6% 81.7%