protein_UL27

Euk-Vir

Panine_betaherpesvirus_2

protein_UL27__NP_612671__Panine_betaherpesvirus_2__188763

Identity

77.8 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Panine_betaherpesvirus_2

TaxID: 188763

View cluster (26 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 37-79_101-116

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6k6wC01	3.40.50.10710	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase	0.58	47.0	3.58e-01	91.5%	73.8%
7sglD01	3.40.50.12650	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.54	45.0	3.54e-01	96.6%	85.4%
8ea4D01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.53	40.0	3.06e-01	86.4%	89.9%
1vq2A00	3.40.140.10	Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2	0.52	40.0	2.92e-01	84.7%	90.8%
1vh7A00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.52	41.0	2.85e-01	96.6%	91.6%
2qqzA01	3.10.180.10	Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1	0.52	38.0	3.21e-01	84.7%	90.4%
4bucA03	3.90.190.20	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain	0.51	40.0	3.28e-01	91.5%	78.9%
3rhfD00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.51	41.0	2.78e-01	100.0%	64.2%
2k6hA01	3.40.420.10	Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1	0.51	34.0	2.63e-01	72.9%	59.8%
5u4nA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.50	40.0	2.63e-01	100.0%	94.3%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5036746	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.60	52.0	3.37e-01	100.0%	89.8%
2097586	2488.1.1.1 ↗	a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase	0.58	40.0	3.02e-01	74.6%	93.2%
2126645	2004.1.1.30 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C	0.53	44.0	3.51e-01	91.5%	78.0%
4940995	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.51	35.0	2.95e-01	74.6%	85.5%

D2 medium residues 117-207_408-438_468-484_580-606

PDB

Domain cluster: rep: protein_UL27__YP_002608241__Human_herpesvirus_5__10359__D150-198_411-491_534-560

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05999.17 best	Herpes_U5	30.1	3.30e-07	27.1%	6.3%
PF05999.17	Herpes_U5	26.9	3.10e-06	27.1%	6.2%
PF05999.17	Herpes_U5	50.7	1.90e-13	26.5%	8.8%

D3 medium residues 208-294_379-407

PDB

Domain cluster: rep: Cy46__YP_009337478__Cynomolgus_cytomegalovirus__1919083__D189-270_352-380

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05999.17 best	Herpes_U5	106.6	2.20e-30	74.1%	17.4%
PF05999.17	Herpes_U5	26.1	5.70e-06	28.4%	5.9%

D4 medium residues 319-378

PDB

Domain cluster: rep: E27a__YP_007016432__Murid_betaherpesvirus_8__1261657__D309-367

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05999.17 best	Herpes_U5	83.4	2.20e-23	100.0%	12.7%