←Back to structures
protein_UL27
Euk-VirCynomolgus_macaque_cytomegalovirus_strain_Ottawa
protein_UL27__YP_004933773__Cynomolgus_macaque_cytomegalovirus_strain_Ottawa__944969
Identity
- Accession:
- YP_004933773 ↗
- Protein ID:
- protein_UL27
- Kingdom:
- euk
Quality
81.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cynomolgus_macaque_cytomegalovirus_strain_Ottawa
TaxID: 944969
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-55_77-89_550-577
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mtvA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.50 | 40.0 | 3.32e-01 | 88.1% | 83.3% |
D2
medium
residues 90-186_469-549
Domain cluster:
rep: protein_UL27__YP_004940053__Aotine_betaherpesvirus_1__50290__D83-177_488-539
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05999.17 best | Herpes_U5 | 41.6 | 1.10e-10 | 32.6% | 9.6% |
D3
medium
residues 187-267_349-388
Domain cluster:
rep: Cy46__YP_009337478__Cynomolgus_cytomegalovirus__1919083__D189-270_352-380
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05999.17 best | Herpes_U5 | 74.9 | 8.90e-21 | 69.4% | 17.0% |
| PF05999.17 | Herpes_U5 | 30.5 | 2.50e-07 | 33.9% | 8.2% |
D4
medium
residues 289-348
Domain cluster:
rep: E27a__YP_007016432__Murid_betaherpesvirus_8__1261657__D309-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05999.17 best | Herpes_U5 | 72.5 | 4.60e-20 | 100.0% | 12.7% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udbB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 39.0 | 2.87e-01 | 78.3% | 59.7% |
| 8b0qA01 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.51 | 37.0 | 2.81e-01 | 83.3% | 47.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3734537 | 4009.1.1.3 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › KTI12 | 0.56 | 38.0 | 3.28e-01 | 70.0% | 93.0% |
| 4059525 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.54 | 45.0 | 3.95e-01 | 98.3% | 72.6% |
| 4029820 | 304.103.1.0 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like | 0.50 | 42.0 | 2.89e-01 | 96.7% | 34.0% |
| 4426619 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.50 | 40.0 | 3.65e-01 | 100.0% | 78.9% |
D5
medium
residues 389-468
Domain cluster:
rep: rh46__YP_068140__Macacine_betaherpesvirus_3__47929__D398-468
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05999.17 best | Herpes_U5 | 78.7 | 6.30e-22 | 100.0% | 16.6% |