←Back to structures
protein_UL38
Euk-VirCercopithecine_betaherpesvirus_5
protein_UL38__YP_004936014__Cercopithecine_betaherpesvirus_5__50292
Identity
- Accession:
- YP_004936014 ↗
- Protein ID:
- protein_UL38
- Kingdom:
- euk
Quality
81.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cercopithecine_betaherpesvirus_5
TaxID: 50292
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-165
Domain cluster:
rep: gp3__YP_007417792__Caviid_betaherpesvirus_2__33706__D377-544
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02393.22 best | US22 | 49.2 | 7.50e-13 | 74.8% | 89.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 30.0 | 3.82e-01 | 77.5% | 89.0% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.56 | 28.0 | 2.85e-01 | 84.8% | 44.6% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.55 | 31.0 | 2.90e-01 | 70.2% | 41.9% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.55 | 25.0 | 3.20e-01 | 83.4% | 72.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 25.0 | 3.23e-01 | 71.5% | 79.7% |
| 2ky8A00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.52 | 24.0 | 3.21e-01 | 76.8% | 87.1% |
| 1a2pA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.51 | 36.0 | 4.11e-01 | 79.5% | 100.0% |
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.50 | 22.0 | 3.26e-01 | 71.5% | 98.3% |
| 1e2tA02 | 3.30.1120.150 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 22.0 | 2.89e-01 | 76.2% | 70.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3912697 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.57 | 27.0 | 3.09e-01 | 70.9% | 59.1% |
| 5048065 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 29.0 | 3.42e-01 | 84.1% | 71.0% |
| 3470353 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.53 | 29.0 | 3.12e-01 | 87.4% | 59.4% |
| 2032855 | 9.28.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Barrel domain in extracellular arabinanase › Barrel domain in extracellular arabinanase › GH43_C | 0.51 | 31.0 | 3.70e-01 | 79.5% | 90.1% |
| 3371576 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 42.0 | 3.01e-01 | 87.4% | 78.2% |
| 3601043 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 38.0 | 2.69e-01 | 77.5% | 28.1% |
| 3727865 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.51 | 35.0 | 3.15e-01 | 84.1% | 48.4% |