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protein_UL79

Euk-Vir

Cynomolgus_macaque_cytomegalovirus_strain_Ottawa

protein_UL79__YP_004933845__Cynomolgus_macaque_cytomegalovirus_strain_Ottawa__944969

Identity

Accession:: YP_004933845 ↗
Protein ID:: protein_UL79
Kingdom:: euk

Quality

74.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Cynomolgus_macaque_cytomegalovirus_strain_Ottawa

TaxID: 944969

Cluster

View cluster (21 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-168

PDB

Domain cluster: rep: ORF10__NP_733863__Callitrichine_gammaherpesvirus_3__106331__D1-109

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03049.21 best	Herpes_UL79	74.9	9.70e-21	100.0%	38.1%

D2 medium residues 28-71_176-205

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03049.21 best	Herpes_UL79	43.0	5.50e-11	62.2%	17.1%
PF03049.21	Herpes_UL79	33.9	3.30e-08	43.2%	12.3%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ck6C02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.58	40.0	3.44e-01	71.6%	71.4%
2l09A01	1.10.8.550	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B	0.58	34.0	3.96e-01	90.5%	82.7%
3rh3A01	1.20.120.930	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829	0.56	52.0	4.14e-01	98.6%	85.0%
5fhiA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.55	46.0	3.72e-01	91.9%	80.6%
6vw7B03	1.20.1440.230	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain	0.53	41.0	3.98e-01	83.8%	81.0%
4mk3A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.53	46.0	3.97e-01	95.9%	96.5%
6jpaE00	1.20.140.150	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 ›	0.53	47.0	3.56e-01	97.3%	72.2%
1zhcA00	6.10.280.50	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.53	40.0	4.05e-01	83.8%	100.0%
1fntc01	1.20.120.180	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain	0.52	46.0	3.43e-01	97.3%	67.6%
2oo2A00	1.20.1270.90	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like	0.52	42.0	4.20e-01	89.2%	86.8%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3250458	5081.1.1.1 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid	0.68	53.0	3.71e-01	81.1%	58.6%
4954907	632.11.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like	0.64	45.0	4.34e-01	74.3%	87.1%
3770225	6026.1.1.18 ↗	alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › PF31011	0.62	48.0	5.12e-01	89.2%	90.8%
2055366	622.1.1.2 ↗	alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HsbA	0.61	42.0	4.07e-01	71.6%	79.3%
3620725	5041.1.1.17 ↗	extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › Periphilin_C	0.59	47.0	4.14e-01	83.8%	73.3%
5016327	605.1.1.2 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim	0.59	41.0	4.23e-01	71.6%	84.3%
3600104	622.1.1.0 ↗	alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain	0.58	44.0	3.71e-01	79.7%	57.6%
2708	101.1.2.49 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C	0.55	43.0	3.27e-01	83.8%	44.4%
3802240	632.1.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain	0.54	46.0	4.09e-01	89.2%	71.0%
3789371	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.53	42.0	4.37e-01	95.9%	94.3%
3973398	604.1.1.250 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF7902	0.50	39.0	3.76e-01	82.4%	77.6%