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protein_UL83B

Euk-Vir

Cercopithecine_betaherpesvirus_5

protein_UL83B__YP_004936050__Cercopithecine_betaherpesvirus_5__50292

Identity

Accession:
YP_004936050 ↗
Protein ID:
protein_UL83B
Kingdom:
euk

Quality

76.0 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Cercopithecine_betaherpesvirus_5

TaxID: 50292

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 125-245
PDB
Domain cluster: rep: protein_UL84__YP_004940247__Saimiriine_betaherpesvirus_4__1535247__D144-278
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05784.17 best Herpes_UL82_83 69.3 3.80e-19 98.4% 32.2%
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uokA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.76 43.0 5.30e-01 85.1% 87.2%
1m53A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.75 42.0 5.22e-01 86.0% 88.3%
5brqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.73 44.0 5.21e-01 86.8% 88.9%
3aj7A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.72 40.0 4.97e-01 86.0% 87.0%
2ze0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 40.0 4.81e-01 86.8% 88.6%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 51.0 5.57e-01 80.2% 96.9%
2ccvA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 49.0 5.27e-01 77.7% 100.0%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 49.0 5.28e-01 83.5% 95.1%
1s3rA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.64 25.0 3.83e-01 86.0% 84.9%
2wstA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.64 53.0 4.70e-01 90.1% 88.6%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 47.0 4.94e-01 92.6% 86.5%
1lmiA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 48.0 4.72e-01 84.3% 87.0%
3wmqA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 44.0 4.86e-01 78.5% 95.7%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.60 45.0 3.93e-01 80.2% 76.3%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.60 45.0 4.18e-01 78.5% 85.9%
2je8B05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 37.0 4.19e-01 81.0% 85.4%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 4.32e-01 89.3% 71.9%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 38.0 4.21e-01 82.6% 84.2%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.57 47.0 4.33e-01 89.3% 69.5%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 38.0 4.20e-01 81.8% 88.0%
5zbeA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 42.0 4.45e-01 90.1% 86.9%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 49.0 3.98e-01 95.0% 92.6%
4q97A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 4.19e-01 81.8% 82.4%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 4.25e-01 81.8% 84.8%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 38.0 4.44e-01 90.9% 97.7%
5h5zA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 4.12e-01 81.8% 89.8%
6a2bA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 37.0 4.14e-01 81.8% 91.0%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 4.32e-01 89.3% 83.6%
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 4.06e-01 81.8% 86.2%
1a6aB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 3.95e-01 83.5% 82.7%
1lp9E02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 34.0 4.03e-01 83.5% 95.0%
1es0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 4.00e-01 81.8% 84.8%
3f8uD03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 4.07e-01 81.8% 86.8%
1shsA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.84e-01 73.6% 92.2%
2x12A01 2.60.40.2010 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 3.83e-01 91.7% 60.5%
3rqwA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.52 40.0 3.47e-01 81.0% 65.8%
2zf9A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.75e-01 89.3% 63.0%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 31.0 3.40e-01 87.6% 72.6%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.52 39.0 3.72e-01 78.5% 87.1%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 42.0 4.13e-01 90.9% 91.5%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.94e-01 99.2% 90.9%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.79e-01 97.5% 76.6%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 34.0 3.69e-01 80.2% 83.2%
3gekA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 41.0 4.04e-01 92.6% 81.7%
2wz8A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 40.0 3.91e-01 87.6% 90.4%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.98e-01 87.6% 83.8%
1umhA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 41.0 3.63e-01 90.1% 83.7%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3714801 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 46.0 4.62e-01 90.9% 68.3%
4258556 11.1.1.66 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG 0.62 43.0 4.72e-01 82.6% 87.0%
4193641 11.4.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF1942 0.61 48.0 4.65e-01 83.5% 84.3%
5007705 11.1.1.257 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Top6b_C 0.61 38.0 4.06e-01 86.8% 71.4%
4943501 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 44.0 4.67e-01 88.4% 87.6%
3462371 10.32.1.198 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 0.59 47.0 4.19e-01 86.0% 96.0%
3628492 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 42.0 4.45e-01 83.5% 86.5%
3875869 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.58 39.0 4.12e-01 83.5% 75.5%
5022719 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 38.0 4.20e-01 86.8% 84.2%
4947251 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 38.0 3.94e-01 90.1% 71.3%
5036913 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 40.0 4.46e-01 87.6% 97.8%
4946267 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 37.0 4.28e-01 89.3% 90.0%
4353523 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.56 39.0 4.22e-01 81.8% 85.0%
5005781 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 40.0 4.18e-01 95.0% 84.8%
3289166 10.20.1.2 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.56 37.0 3.72e-01 79.3% 66.7%
4648192 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 40.0 4.08e-01 95.0% 78.3%
3742620 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.56 40.0 4.09e-01 90.1% 77.4%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 44.0 4.32e-01 85.1% 89.2%
3895887 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.55 37.0 3.59e-01 81.8% 61.5%
3648159 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 39.0 3.81e-01 72.7% 76.9%
3915523 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.54 38.0 3.75e-01 78.5% 65.2%
3491698 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 3.79e-01 82.6% 87.1%
3226630 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 44.0 4.10e-01 90.1% 78.8%
3265117 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 40.0 4.18e-01 85.1% 82.6%
3262641 12.3.1.46 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.54 43.0 3.54e-01 87.6% 94.5%
3542615 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.54 36.0 3.94e-01 82.6% 86.3%
3611768 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 3.89e-01 88.4% 74.4%
4668207 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 3.91e-01 90.9% 73.1%
3241496 11.1.5.94 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.52 41.0 3.79e-01 91.7% 63.7%
3214839 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.52 42.0 3.89e-01 88.4% 83.1%
3385480 319.3.1.3 ↗ beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › DUF7494 0.52 39.0 3.76e-01 77.7% 80.7%
3791610 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 36.0 3.91e-01 80.2% 87.0%
5055337 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 39.0 3.59e-01 79.3% 86.3%
4962172 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.92e-01 90.9% 78.7%
4936979 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 36.0 3.52e-01 71.1% 79.2%
4211656 11.1.5.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.51 39.0 4.16e-01 80.2% 97.0%
4971476 2499.1.1.0 ↗ a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.51 42.0 3.04e-01 90.9% 46.4%
4974879 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.50 39.0 3.49e-01 80.2% 80.0%
D2 medium residues 13-124_328-381_441-496
PDB
Domain cluster: rep: E84__YP_007016481__Murid_betaherpesvirus_8__1261657__D3-113_445-495
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05784.17 best Herpes_UL82_83 81.5 7.70e-23 55.4% 32.8%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bsyA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.74 46.0 5.62e-01 86.0% 93.9%
2y8kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 33.0 3.99e-01 100.0% 67.6%
3ecyA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.66 35.0 4.71e-01 74.8% 95.0%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 33.0 4.20e-01 100.0% 80.0%
6lj3A01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.66 37.0 4.61e-01 86.9% 86.6%
3c7fA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 33.0 4.09e-01 99.5% 74.6%
5f7uA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 32.0 4.16e-01 99.1% 81.0%
1w0nA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 32.0 4.21e-01 99.5% 84.2%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 33.0 4.26e-01 99.1% 85.2%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 32.0 4.13e-01 98.6% 81.1%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 35.0 4.36e-01 99.1% 87.0%
7ehgC01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 32.0 4.01e-01 99.5% 82.2%
1qunI01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 32.0 4.30e-01 94.6% 95.7%
1o5uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 22.0 3.37e-01 97.7% 77.3%
1qppA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 31.0 4.19e-01 94.1% 93.9%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 30.0 3.80e-01 99.1% 77.4%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 34.0 3.85e-01 100.0% 72.6%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.58 33.0 4.20e-01 99.5% 93.8%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.58 34.0 4.23e-01 98.6% 91.4%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.57 30.0 3.94e-01 95.0% 92.3%
4xjcF00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.57 37.0 4.29e-01 99.5% 86.4%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 37.0 4.05e-01 99.5% 78.8%
3eqeA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 27.0 3.16e-01 96.8% 60.9%
2hr0B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 28.0 3.74e-01 94.1% 90.8%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.55 32.0 3.87e-01 98.6% 86.5%
3kq4B03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.55 27.0 3.58e-01 99.5% 86.6%
3ideA02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.55 33.0 3.99e-01 99.1% 90.9%
2hevF00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.54 29.0 3.79e-01 98.2% 90.5%
4qpwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 33.0 3.99e-01 99.5% 93.7%
3gbwA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.53 35.0 4.05e-01 100.0% 91.9%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.52 31.0 3.85e-01 96.8% 94.9%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 35.0 3.47e-01 100.0% 64.7%
7nitA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 30.0 3.38e-01 100.0% 72.7%
1bu8A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.51 26.0 3.58e-01 84.2% 100.0%
3kq4B02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.51 27.0 3.51e-01 99.1% 93.2%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 32.0 3.84e-01 98.6% 96.5%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 30.0 3.75e-01 98.2% 97.7%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 33.0 3.82e-01 98.6% 91.2%
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 33.0 3.91e-01 99.5% 95.5%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 31.0 3.71e-01 100.0% 93.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3946137 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 27.0 4.59e-01 95.0% 96.2%
4062534 10.32.1.6 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.67 34.0 4.43e-01 98.2% 86.2%
3804238 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 34.0 4.09e-01 100.0% 75.2%
4999938 10.34.1.0 ↗ beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain 0.64 22.0 3.84e-01 95.5% 92.0%
3486965 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 31.0 3.74e-01 99.1% 67.3%
3919527 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 30.0 4.14e-01 99.5% 90.5%
4966568 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.64 36.0 4.47e-01 99.1% 87.1%
3624991 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 29.0 4.04e-01 97.7% 87.6%
5058689 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 30.0 4.31e-01 96.4% 98.0%
5071462 10.34.1.0 ↗ beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain 0.63 23.0 3.82e-01 95.9% 93.3%
5076478 10.34.1.0 ↗ beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain 0.63 22.0 3.72e-01 95.0% 90.7%
3932352 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.62 31.0 4.41e-01 97.7% 100.0%
4990331 10.34.1.0 ↗ beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain 0.62 22.0 3.82e-01 95.9% 98.6%
4956341 10.34.1.0 ↗ beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain 0.62 20.0 3.69e-01 93.2% 94.3%
4937335 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 35.0 3.93e-01 100.0% 70.6%
3889465 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 31.0 4.20e-01 98.6% 92.2%
3789651 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 31.0 4.30e-01 98.6% 97.3%
5059298 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 33.0 4.15e-01 94.6% 86.2%
3355441 10.9.1.1 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV 0.61 37.0 4.24e-01 98.2% 81.2%
5068228 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 29.0 4.06e-01 98.6% 93.3%
5039236 10.1.2.191 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM60 0.61 33.0 4.02e-01 100.0% 80.7%
3474123 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 32.0 4.12e-01 98.6% 89.2%
4245506 11.1.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M 0.61 30.0 4.10e-01 94.6% 95.2%
3930491 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.60 31.0 4.22e-01 98.2% 97.3%
3927098 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 30.0 3.99e-01 98.2% 90.9%
1725184 10.43.1.1 ↗ beta sandwiches › jelly-roll › Major structural protein 1 jelly-roll domain › Major structural protein 1 jelly-roll domain › MSP1_barrel 0.60 30.0 3.77e-01 99.1% 78.9%
3188436 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 34.0 3.91e-01 100.0% 75.6%
3380052 10.9.1.1 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV 0.59 37.0 4.13e-01 100.0% 79.4%
3469207 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 25.0 3.81e-01 90.5% 98.8%
4890244 11.1.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M 0.59 29.0 3.97e-01 94.6% 93.5%
3451719 10.2.1.55 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.59 26.0 3.75e-01 97.7% 91.6%
5062200 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.58 37.0 4.28e-01 99.5% 84.8%
4938291 10.3.1.0 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like 0.58 34.0 4.28e-01 99.5% 95.4%
3230374 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 34.0 4.03e-01 100.0% 84.7%
5000606 10.34.1.0 ↗ beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain 0.57 19.0 3.45e-01 92.8% 93.3%
3715178 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.56 33.0 4.16e-01 95.5% 94.8%
4302120 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.56 29.0 3.87e-01 98.6% 98.1%
4019681 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 30.0 3.64e-01 98.6% 78.6%
5056309 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.56 36.0 4.23e-01 98.6% 89.4%
3256150 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.56 28.0 3.64e-01 98.6% 87.0%
3500271 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 32.0 4.17e-01 81.1% 100.0%
4882054 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.55 28.0 3.50e-01 100.0% 79.8%
5042019 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.55 36.0 4.18e-01 99.1% 89.1%
3220762 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.54 28.0 3.61e-01 98.6% 85.6%
3402639 11.1.1.495 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MYCBPAP 0.54 30.0 3.68e-01 95.9% 84.3%
3860289 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.54 31.0 3.68e-01 99.1% 80.0%
4984664 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.54 37.0 4.06e-01 99.5% 85.0%
3599776 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 29.0 3.81e-01 98.6% 97.5%
134193 10.40.1.1 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.53 35.0 4.05e-01 100.0% 91.9%
3931580 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.53 27.0 3.44e-01 99.5% 85.0%
3282993 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.52 33.0 3.95e-01 95.9% 92.7%
3179284 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 35.0 4.11e-01 99.1% 94.4%
3938202 11.2.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.52 31.0 3.98e-01 89.6% 100.0%
4001960 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.52 26.0 3.25e-01 100.0% 74.8%
None — 0.52 37.0 4.10e-01 99.5% 90.0%
1316605 10.32.1.50 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF5077 0.51 31.0 3.89e-01 85.6% 99.2%
3580623 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 32.0 3.81e-01 100.0% 90.7%
3891207 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 28.0 3.59e-01 91.4% 92.0%
3234100 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 26.0 3.37e-01 99.1% 90.0%
4667107 10.3.1.0 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like 0.51 32.0 3.83e-01 100.0% 95.2%
3564706 11.1.1.573 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cep192_D5 0.50 39.0 4.23e-01 96.4% 97.3%
1143 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.50 33.0 3.91e-01 99.5% 95.5%
D3 medium residues 246-327
PDB
Domain cluster: rep: GP72__YP_007417837__Caviid_betaherpesvirus_2__33706__D239-337
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05784.17 best Herpes_UL82_83 82.4 4.10e-23 100.0% 23.8%