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protein_UL84
Euk-VirSaimiriine_betaherpesvirus_4
protein_UL84__YP_004940247__Saimiriine_betaherpesvirus_4__1535247
Identity
- Accession:
- YP_004940247 ↗
- Protein ID:
- protein_UL84
- Kingdom:
- euk
Quality
76.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Saimiriine_betaherpesvirus_4
TaxID: 1535247
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-138_395-436
Domain cluster:
rep: protein_UL84__YP_002608276__Human_herpesvirus_5__10359__D87-136_182-239
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06284.17 best | Cytomega_UL84 | 67.8 | 9.90e-19 | 42.2% | 9.4% |
| PF06284.17 | Cytomega_UL84 | 29.4 | 4.40e-07 | 37.0% | 8.2% |
D2
high
residues 144-278
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06284.17 best | Cytomega_UL84 | 65.8 | 4.00e-18 | 77.8% | 17.1% |
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 38.0 | 4.94e-01 | 78.5% | 94.9% |
| 5brqA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.68 | 39.0 | 4.95e-01 | 79.3% | 95.1% |
| 3ttyA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 32.0 | 4.53e-01 | 78.5% | 100.0% |
| 6sl4A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.65 | 51.0 | 4.94e-01 | 82.2% | 73.3% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 45.0 | 5.12e-01 | 74.8% | 95.1% |
| 2cwrA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 38.0 | 4.35e-01 | 80.0% | 79.4% |
| 4b96A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.64 | 49.0 | 4.76e-01 | 82.2% | 71.5% |
| 2vo8A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 43.0 | 4.34e-01 | 79.3% | 68.1% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.63 | 47.0 | 4.04e-01 | 86.7% | 50.2% |
| 3aj7A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 34.0 | 4.43e-01 | 78.5% | 93.5% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.62 | 43.0 | 4.89e-01 | 71.9% | 97.1% |
| 5do8B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 34.0 | 4.41e-01 | 80.0% | 94.8% |
| 3wmqA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 41.0 | 4.73e-01 | 70.4% | 95.7% |
| 1lmiA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 45.0 | 4.57e-01 | 77.0% | 86.3% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 47.0 | 4.63e-01 | 83.0% | 78.3% |
| 3b34A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 39.0 | 3.54e-01 | 84.4% | 48.9% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 48.0 | 4.03e-01 | 85.9% | 52.7% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.59 | 41.0 | 4.01e-01 | 71.9% | 88.6% |
| 5gxxA02 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.58 | 46.0 | 4.36e-01 | 82.2% | 72.6% |
| 2c9kA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 45.0 | 4.28e-01 | 87.4% | 89.6% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 3.96e-01 | 77.0% | 81.9% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 40.0 | 3.43e-01 | 74.1% | 84.8% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 42.0 | 4.63e-01 | 80.0% | 100.0% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 39.0 | 3.21e-01 | 73.3% | 64.6% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.55 | 39.0 | 4.32e-01 | 73.3% | 94.2% |
| 1v05A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 3.84e-01 | 71.9% | 84.4% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 39.0 | 3.61e-01 | 74.1% | 96.1% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 39.0 | 3.39e-01 | 74.1% | 83.2% |
| 6a48A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 41.0 | 4.11e-01 | 81.5% | 88.7% |
| 3kptA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 3.87e-01 | 80.7% | 72.3% |
| 2x12A01 | 2.60.40.2010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 3.89e-01 | 86.7% | 81.6% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 41.0 | 4.41e-01 | 82.2% | 99.1% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.53 | 40.0 | 3.84e-01 | 77.8% | 81.8% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 42.0 | 4.06e-01 | 84.4% | 90.4% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 3.48e-01 | 74.8% | 87.3% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 37.0 | 3.37e-01 | 71.1% | 91.4% |
| 5dawA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.53 | 41.0 | 3.33e-01 | 84.4% | 88.2% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.53 | 40.0 | 3.58e-01 | 80.0% | 97.0% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.53 | 39.0 | 4.04e-01 | 80.7% | 84.4% |
| 3byqA00 | 3.30.1330.110 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 | 0.52 | 42.0 | 3.78e-01 | 87.4% | 99.5% |
| 3ptyA02 | 2.60.120.940 | Mainly Beta › Sandwich › Jelly Rolls › EmbC, C-terminal domain, subdomain 2 | 0.52 | 42.0 | 3.85e-01 | 86.7% | 92.1% |
| 5yblD01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 40.0 | 3.32e-01 | 81.5% | 92.7% |
| 5h5zA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.64e-01 | 75.6% | 89.8% |
| 1mmuA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 44.0 | 3.36e-01 | 94.8% | 87.3% |
| 6s0tA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 39.0 | 3.33e-01 | 83.0% | 87.9% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.51 | 42.0 | 3.83e-01 | 91.1% | 75.3% |
| 3vsmA02 | 2.70.98.100 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 | 0.51 | 44.0 | 3.95e-01 | 93.3% | 97.4% |
| 4w6yA00 | 2.60.120.1210 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 38.0 | 3.78e-01 | 83.7% | 72.6% |
| 3f8uD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.72e-01 | 71.1% | 86.8% |
| 3ks7A01 | 2.60.120.1570 | Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain | 0.50 | 35.0 | 3.07e-01 | 71.9% | 93.4% |
| 2e26A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 39.0 | 3.75e-01 | 81.5% | 84.5% |
| 2vecA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 39.0 | 4.09e-01 | 82.2% | 89.5% |
| 1tg7A04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 40.0 | 3.72e-01 | 84.4% | 74.7% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017052 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.66 | 45.0 | 4.18e-01 | 81.5% | 54.3% |
| 3194998 | 4178.1.1.3 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF4140 | 0.66 | 48.0 | 4.83e-01 | 81.5% | 75.6% |
| 5042033 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.64 | 42.0 | 4.02e-01 | 80.7% | 56.2% |
| 5046532 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 46.0 | 4.69e-01 | 83.7% | 74.8% |
| 1714453 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.64 | 43.0 | 5.04e-01 | 70.4% | 98.9% |
| 3929117 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.62 | 39.0 | 4.28e-01 | 80.0% | 77.3% |
| 5051358 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 40.0 | 4.42e-01 | 80.0% | 82.9% |
| 3389168 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.61 | 45.0 | 3.88e-01 | 80.7% | 49.8% |
| 3462371 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.61 | 47.0 | 4.29e-01 | 80.0% | 97.7% |
| 3250716 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 41.0 | 4.55e-01 | 82.2% | 88.6% |
| 3392702 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 47.0 | 4.02e-01 | 86.7% | 51.6% |
| 3418365 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.59 | 49.0 | 3.47e-01 | 88.1% | 89.0% |
| 5039956 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.59 | 41.0 | 3.73e-01 | 71.9% | 96.3% |
| 1851176 | 5092.1.1.0 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins | 0.59 | 45.0 | 4.52e-01 | 80.7% | 94.1% |
| 3578304 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.59 | 42.0 | 4.22e-01 | 81.5% | 72.1% |
| 3860289 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.58 | 45.0 | 4.32e-01 | 81.5% | 74.8% |
| 3892744 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.58 | 39.0 | 4.05e-01 | 82.2% | 72.8% |
| 3527031 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.58 | 38.0 | 3.97e-01 | 80.7% | 72.5% |
| 3238181 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.58 | 47.0 | 4.02e-01 | 90.4% | 54.4% |
| 5007335 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 38.0 | 3.59e-01 | 80.0% | 53.9% |
| 3471279 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.57 | 37.0 | 4.00e-01 | 80.0% | 78.2% |
| 4638448 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.57 | 42.0 | 4.65e-01 | 81.5% | 100.0% |
| 4045917 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.57 | 44.0 | 4.71e-01 | 88.1% | 96.5% |
| 3229834 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.57 | 43.0 | 4.16e-01 | 81.5% | 70.0% |
| 3262641 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.56 | 45.0 | 3.78e-01 | 85.9% | 81.3% |
| 4946917 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 38.0 | 4.00e-01 | 80.7% | 75.8% |
| 3880551 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.56 | 37.0 | 4.00e-01 | 81.5% | 78.3% |
| 5059640 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 40.0 | 4.08e-01 | 77.8% | 75.4% |
| 4353523 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.56 | 35.0 | 3.98e-01 | 77.0% | 84.0% |
| 5037360 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.56 | 34.0 | 3.64e-01 | 71.9% | 69.6% |
| 1444532 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.56 | 40.0 | 3.43e-01 | 74.1% | 84.8% |
| 3420320 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 37.0 | 3.64e-01 | 79.3% | 62.1% |
| 3218582 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 40.0 | 3.91e-01 | 80.0% | 67.3% |
| 4957582 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 44.0 | 3.94e-01 | 84.4% | 78.4% |
| 2884908 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 42.0 | 3.88e-01 | 82.2% | 70.3% |
| 3491160 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 42.0 | 4.09e-01 | 80.7% | 74.0% |
| 3289166 | 10.20.1.2 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N | 0.55 | 34.0 | 3.58e-01 | 71.9% | 68.3% |
| 4945616 | 11.1.1.1399 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF553 | 0.55 | 34.0 | 3.59e-01 | 71.1% | 70.4% |
| 4268909 | 10.32.1.288 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TSP_3 | 0.55 | 43.0 | 3.84e-01 | 84.4% | 63.1% |
| 3592708 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 39.0 | 3.73e-01 | 74.8% | 86.3% |
| 2700769 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.54 | 41.0 | 4.23e-01 | 83.7% | 87.1% |
| 5040908 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.54 | 39.0 | 4.03e-01 | 84.4% | 80.0% |
| 5039010 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 39.0 | 4.04e-01 | 77.0% | 88.5% |
| 3286458 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 40.0 | 4.20e-01 | 80.7% | 100.0% |
| 4125065 | 10.32.1.214 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BRINP | 0.53 | 44.0 | 3.90e-01 | 91.1% | 70.2% |
| 3275765 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 32.0 | 3.48e-01 | 71.9% | 71.8% |
| 5007278 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 38.0 | 3.92e-01 | 76.3% | 76.9% |
| 4943486 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 38.0 | 4.01e-01 | 80.0% | 81.6% |
| 4513211 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.52 | 42.0 | 4.40e-01 | 87.4% | 100.0% |
| 3818454 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 41.0 | 3.49e-01 | 83.7% | 89.3% |
| 3967083 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 31.0 | 3.64e-01 | 83.0% | 84.2% |
| 3934435 | 4081.1.1.13 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF4139 | 0.52 | 41.0 | 4.11e-01 | 84.4% | 90.0% |
| 3221922 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.51 | 40.0 | 3.97e-01 | 83.7% | 91.7% |
| 3735662 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.51 | 41.0 | 3.92e-01 | 87.4% | 87.9% |
| 4220882 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.51 | 34.0 | 3.27e-01 | 71.1% | 57.4% |
| 5046147 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 39.0 | 3.38e-01 | 81.5% | 77.1% |
| 3491698 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.75e-01 | 85.9% | 80.0% |
D3
high
residues 295-382
Domain cluster:
rep: virion_transactivator_tegument__YP_009344900__Murine_roseolovirus__1940555__D266-350
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06284.17 best | Cytomega_UL84 | 105.0 | 5.40e-30 | 100.0% | 15.4% |
| PF06501.16 | Herpes_U55 | 23.6 | 3.10e-05 | 93.2% | 12.7% |