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protein_UL84

Euk-Vir

Elephant_endotheliotropic_herpesvirus_5

protein_UL84__YP_009051994__Elephant_endotheliotropic_herpesvirus_5__768738

Identity

Accession:
YP_009051994 ↗
Protein ID:
protein_UL84
Kingdom:
euk

Quality

59.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-109_365-397
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bsyA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.74 65.0 6.46e-01 100.0% 89.8%
2bsyA02 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.73 50.0 5.75e-01 72.1% 96.1%
7plsA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.72 43.0 5.19e-01 97.9% 89.2%
2ylkA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.71 53.0 5.30e-01 100.0% 75.2%
6sl4A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.69 54.0 5.33e-01 100.0% 76.7%
4b97A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.69 54.0 5.30e-01 100.0% 76.2%
1xs1A00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.69 49.0 4.39e-01 73.6% 75.1%
1tulA00 2.70.40.20 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 0.68 47.0 5.42e-01 97.1% 97.1%
4b96A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.68 52.0 5.13e-01 100.0% 74.8%
6ibkA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 41.0 4.80e-01 97.1% 89.7%
2xbtA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.65 52.0 5.04e-01 100.0% 74.7%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 35.0 4.34e-01 100.0% 84.7%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 45.0 4.56e-01 100.0% 74.8%
6lj3A01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.63 52.0 5.22e-01 100.0% 86.6%
3esmA00 2.60.40.2230 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein YcnI-like PF07987, DUF1775 0.63 42.0 4.23e-01 99.3% 67.4%
2l8aA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.63 48.0 4.74e-01 100.0% 75.8%
3ndzE00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 40.0 4.48e-01 100.0% 84.1%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 39.0 4.35e-01 100.0% 81.9%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 42.0 4.74e-01 95.7% 95.1%
6grsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 38.0 4.42e-01 82.1% 89.5%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.59 46.0 4.47e-01 100.0% 74.0%
2wfpA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 35.0 4.07e-01 97.9% 84.7%
2gy5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 33.0 3.77e-01 100.0% 77.8%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 4.61e-01 100.0% 89.9%
4mboA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 46.0 4.56e-01 100.0% 83.4%
3km3B00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.55 49.0 4.74e-01 94.3% 87.2%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 35.0 4.26e-01 95.7% 100.0%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 3.97e-01 89.3% 84.1%
1yllC02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 37.0 4.18e-01 97.9% 89.0%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 35.0 4.00e-01 97.1% 88.0%
2qsvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 4.01e-01 90.7% 85.2%
1m1sA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 4.21e-01 87.9% 91.7%
1cqkA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 35.0 4.03e-01 90.0% 89.1%
7y6oA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 32.0 3.90e-01 97.9% 91.1%
5eiqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.79e-01 90.0% 91.2%
2vecA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 36.0 4.06e-01 96.4% 93.2%
2luwA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.53 34.0 3.84e-01 100.0% 88.1%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.53 37.0 4.07e-01 100.0% 92.7%
2xzm901 6.20.50.180 Special › Other non-globular › N-terminal domain of TfIIb › 0.53 21.0 2.78e-01 81.4% 65.3%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 4.16e-01 99.3% 87.7%
2je8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 4.06e-01 89.3% 93.6%
1jhjA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 44.0 4.27e-01 100.0% 81.4%
5z1aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 4.11e-01 88.6% 92.4%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 4.05e-01 90.7% 90.4%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 4.26e-01 97.1% 99.1%
1gqgC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 35.0 3.60e-01 100.0% 70.0%
3f8uD03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.93e-01 87.9% 93.4%
3fbqA02 2.60.40.1640 Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. 0.51 42.0 4.28e-01 98.6% 90.6%
3qw9B00 2.60.40.4100 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain 0.51 41.0 3.92e-01 87.1% 91.0%
3es4A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 34.0 3.72e-01 100.0% 82.8%
5z6pA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.51 46.0 4.25e-01 100.0% 89.9%
1bqsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 36.0 3.87e-01 88.6% 88.2%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
367299 70.2.1.0 beta barrels › beta-clip › dUTPase-like › dUTPase-like 0.79 54.0 5.98e-01 75.7% 86.6%
149587 11.1.5.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 0.72 54.0 5.36e-01 100.0% 74.7%
4075672 70.2.1.5 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.70 50.0 4.48e-01 72.9% 75.8%
4339228 11.1.5.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 0.68 54.0 5.15e-01 100.0% 72.5%
4036811 11.1.5.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 0.67 57.0 5.29e-01 100.0% 72.6%
4189335 11.1.5.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.66 39.0 4.83e-01 100.0% 97.6%
5034162 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.65 40.0 4.63e-01 88.6% 85.0%
3270396 12.1.1.25 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C 0.65 41.0 4.90e-01 97.9% 93.7%
3946137 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 34.0 4.35e-01 89.3% 91.3%
5035459 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.63 38.0 4.79e-01 70.0% 100.0%
5013259 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 41.0 4.36e-01 100.0% 76.0%
3611129 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 42.0 4.65e-01 97.9% 87.3%
3831284 207.1.1.465 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3, LRR_4 0.62 44.0 3.03e-01 100.0% 21.9%
3249705 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 36.0 4.28e-01 80.0% 88.9%
1247195 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.61 51.0 5.22e-01 89.3% 91.2%
3252999 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 33.0 4.11e-01 94.3% 90.0%
4938065 11.1.1.360 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig 0.60 37.0 4.43e-01 88.6% 93.3%
3342010 11.1.1.235 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3_6 0.60 38.0 4.43e-01 97.1% 91.6%
5038999 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.60 41.0 3.69e-01 100.0% 49.0%
5056360 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 38.0 4.37e-01 100.0% 91.6%
3596678 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 42.0 4.60e-01 97.1% 91.8%
3516960 12.1.1.25 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C 0.59 41.0 4.54e-01 99.3% 90.0%
5040751 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 41.0 4.51e-01 100.0% 91.8%
4946955 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 33.0 3.90e-01 100.0% 81.1%
5017252 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 33.0 4.07e-01 89.3% 91.8%
3302977 207.1.1.37 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.58 43.0 3.29e-01 100.0% 32.8%
3933402 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.58 38.0 4.14e-01 98.6% 80.9%
3543937 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.57 45.0 4.45e-01 100.0% 80.0%
3388184 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 37.0 4.34e-01 96.4% 94.9%
4033020 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 48.0 4.64e-01 100.0% 80.6%
3628492 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 38.0 4.33e-01 92.9% 93.3%
5062794 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 37.0 4.16e-01 82.9% 92.0%
5059784 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 32.0 3.87e-01 82.9% 86.7%
3788216 11.1.1.865 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26254 0.55 41.0 4.12e-01 77.9% 76.4%
5038369 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 34.0 3.91e-01 75.0% 85.0%
4230092 10.12.1.28 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HutD 0.55 39.0 4.15e-01 94.3% 84.2%
5038886 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.55 38.0 4.20e-01 90.7% 90.9%
3917437 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 4.13e-01 98.6% 83.2%
3542615 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.54 34.0 3.87e-01 95.0% 88.4%
150670 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 38.0 4.14e-01 97.1% 88.6%
3676965 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 41.0 4.12e-01 100.0% 78.6%
4151774 10.12.1.28 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HutD 0.54 39.0 4.09e-01 97.9% 84.0%
4299010 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 35.0 4.07e-01 86.4% 97.9%
5038729 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 4.05e-01 89.3% 92.4%
3257261 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.53 43.0 3.94e-01 100.0% 65.4%
2785992 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.52 35.0 3.95e-01 90.7% 91.3%
4944261 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 42.0 3.36e-01 85.7% 71.8%
3424937 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.52 47.0 4.38e-01 100.0% 87.4%
3269882 11.1.1.214 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N 0.52 35.0 4.01e-01 72.9% 97.0%
4623622 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 34.0 3.97e-01 89.3% 98.9%
4966022 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 41.0 4.17e-01 100.0% 88.9%
200089 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.51 34.0 3.73e-01 100.0% 82.8%
3172792 1.1.7.24 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.50 35.0 3.89e-01 70.7% 96.2%
3917151 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.50 31.0 3.63e-01 89.3% 90.5%
3970694 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 33.0 3.70e-01 96.4% 86.4%
3900718 10.2.1.18 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monooxygen 0.50 42.0 4.27e-01 91.4% 97.9%
D2 high residues 130-288
PDB
D3 medium residues 290-330_342-360
PDB