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protein_UL84

Euk-Vir

Macaca_nemestrina_herpesvirus_7

protein_UL84__YP_009253961__Macaca_nemestrina_herpesvirus_7__1846169

Identity

Accession:
YP_009253961 ↗
Protein ID:
protein_UL84
Kingdom:
euk

Quality

82.0 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Roseolovirus› macacine_betaherpesvirus_9

TaxID: 1846169

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-90_356-421
PDB
Domain cluster: rep: protein_U55B__YP_009253962__Macaca_nemestrina_herpesvirus_7__1846169__D6-95_358-428
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF06501.16 best Herpes_U55 66.8 2.30e-18 59.9% 20.1%
PF06501.16 Herpes_U55 30.9 1.90e-07 44.1% 15.5%
D2 high residues 93-249
PDB
Domain cluster: rep: protein_UL84__YP_004940247__Saimiriine_betaherpesvirus_4__1535247__D144-278
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06501.16 best Herpes_U55 150.2 1.10e-43 100.0% 37.0%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uokA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.76 35.0 4.96e-01 77.7% 89.7%
5brqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.75 37.0 4.98e-01 78.3% 90.1%
5do8B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 32.0 4.38e-01 80.3% 90.9%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.66 49.0 5.32e-01 84.1% 90.9%
5gxxA02 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.60 44.0 4.42e-01 80.9% 73.9%
1hxmB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 34.0 4.05e-01 75.2% 81.9%
5zbeA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 36.0 4.35e-01 82.2% 88.8%
4q9bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 34.0 4.12e-01 74.5% 86.1%
1g87A02 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.57 40.0 4.04e-01 80.9% 70.4%
2mklC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 33.0 3.89e-01 74.5% 82.9%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 39.0 4.01e-01 84.7% 73.0%
4p02B01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 38.0 4.07e-01 82.2% 80.5%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 31.0 3.85e-01 77.1% 85.9%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.56 35.0 4.17e-01 72.0% 94.2%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 4.06e-01 77.7% 74.5%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 31.0 3.72e-01 78.3% 80.6%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 33.0 3.85e-01 76.4% 86.1%
3bvxA05 2.60.40.1360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 32.0 3.96e-01 79.6% 95.8%
4rd7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 32.0 3.70e-01 80.3% 82.4%
2pfcA00 3.10.129.30 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain 0.52 39.0 3.92e-01 89.2% 76.2%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 37.0 3.40e-01 73.2% 78.2%
4lesA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 38.0 4.03e-01 80.3% 93.0%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 26.0 3.07e-01 93.6% 70.9%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3673946 12.1.1.63 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Raffinose_syn 0.72 38.0 5.09e-01 79.6% 96.4%
3977912 12.1.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C 0.71 33.0 4.70e-01 77.7% 92.0%
3643659 12.1.1.63 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Raffinose_syn 0.70 39.0 4.72e-01 80.9% 83.0%
1300186 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.60 34.0 4.12e-01 74.5% 86.1%
5059640 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 37.0 4.04e-01 76.4% 75.4%
3261163 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 37.0 4.18e-01 79.0% 85.2%
5034124 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 32.0 3.68e-01 79.0% 74.8%
4154363 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.56 34.0 3.76e-01 74.5% 71.5%
3199684 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 42.0 3.71e-01 77.7% 76.5%
3274460 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 34.0 3.60e-01 73.2% 67.4%
4981531 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 36.0 3.82e-01 77.1% 74.1%
3921542 10.32.1.69 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B 0.55 40.0 3.68e-01 73.9% 78.5%
3593942 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 38.0 3.93e-01 70.7% 86.7%
3921175 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 32.0 3.84e-01 71.3% 89.0%
3619352 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 41.0 4.16e-01 91.7% 80.6%
3263214 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.51 45.0 3.99e-01 96.2% 91.1%
3896267 10.32.1.69 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B 0.51 40.0 3.56e-01 83.4% 67.6%
3499097 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.51 39.0 4.10e-01 82.2% 92.4%
3477594 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 37.0 3.79e-01 78.3% 76.8%
D3 high residues 259-350
PDB
Domain cluster: rep: GP72__YP_007417837__Caviid_betaherpesvirus_2__33706__D239-337
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06501.16 best Herpes_U55 101.2 8.50e-29 100.0% 20.8%