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protein_UL87

Euk-Vir

Equid_gammaherpesvirus_5

protein_UL87__YP_009118414__Equid_gammaherpesvirus_5__10371

Identity

Accession:
YP_009118414 ↗
Protein ID:
protein_UL87
Kingdom:
euk

Quality

64.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 267-410
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03043.21 best Herpes_UL87 58.9 5.60e-16 99.3% 24.1%
D2 medium residues 46-117_170-260
PDB
D3 medium residues 118-169
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oyrA01 3.40.1630.10 Alpha Beta › 3-Layer(aba) Sandwich › S-adenosyl-L-methionine-dependent methyltransferases › YhiQ-like domain 0.59 45.0 4.50e-01 86.5% 83.6%
3h78A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.59 43.0 3.23e-01 84.6% 50.3%
3ledA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.56 40.0 3.06e-01 84.6% 53.8%
7xlqD01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 35.0 2.86e-01 78.8% 80.6%
1ecsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 34.0 2.64e-01 98.1% 30.0%
2fckA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 36.0 2.71e-01 100.0% 25.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5065528 330.7.1.0 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.56 34.0 3.09e-01 86.5% 44.3%
4506923 12.1.1.29 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_30C 0.54 41.0 3.31e-01 88.5% 66.4%
2723972 1143.1.1.1 beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C 0.53 35.0 3.11e-01 88.5% 44.4%
4962294 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 37.0 3.36e-01 100.0% 52.9%
5723 211.1.1.41 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF31120 0.50 34.0 3.46e-01 98.1% 69.2%
4127231 12.1.1.15 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › BetaGal_dom2 0.50 34.0 3.07e-01 73.1% 92.5%
D4 medium residues 488-511_605-692
PDB
D5 medium residues 512-604
PDB